RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 SPECC1LQ69YQ0 1117 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 ZNF774Q6NX45 483 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 TMEM53Q6P2H8 277 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 TTC23LQ6PF05 361 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 MYO7BQ6PIF6 2116 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 IGFL3Q6UXB1 125 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 Q6ZR54 194 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 TGIF2LYQ8IUE0 185 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 ACBD4Q8NC06 268 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 C8orf44Q96CB5 159 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 BTN2A3PQ96KV6 586 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 SERPINB11Q96P15 392 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 TSG101Q99816 390 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 ULBP1Q9BZM6 244 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 DNTTIP1Q9H147 329 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 CLSTN2Q9H4D0 955 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 RNF167Q9H6Y7 350 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 RDH14Q9HBH5 336 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 AGPAT4Q9NRZ5 378 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 ASF1BQ9NVP2 202 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 CALYQ9NYX4 217 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 ACANP16112 2415 aa3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 MN1Q10571 1320 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC9-216ENST00000634178 FBN1P35555 2871 aaKnown RBP3.65□□□□□ -1.82
TRAPPC9-216ENST00000634178 E7ENQ6 273 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 CDC7O00311 574 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 PHOX2AO14813 284 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 PPP1R2P9O14990 202 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 POLR1CO15160 346 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 MMP23AO75900 390 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 TNFP01375 233 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 ALDOBP05062 364 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 ANXA5P08758 320 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 GIG44P09565 113 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 RGRP47804 291 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 MRPL19P49406 292 aaKnown RBP3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 TMED10P49755 219 aaKnown RBP3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 DAOAP59103 153 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 ADARB1P78563 741 aaKnown RBP3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 ZNF763Q0D2J5 394 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 PDIA2Q13087 525 aaKnown RBP3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 MAB21L1Q13394 359 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 EIF4EBP2Q13542 120 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 NSDHLQ15738 373 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 ALKBH6Q3KRA9 238 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 REEP3Q6NUK4 255 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 C1orf94Q6P1W5 598 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 SCARA5Q6ZMJ2 495 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 LHFPL3Q86UP9 236 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 KATNAL2Q8IYT4 538 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 OFCC1Q8IZS5 231 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 PDIK1LQ8N165 341 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 MS4A15Q8N5U1 240 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 ZNF740Q8NDX6 193 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 OR1N2Q8NGR9 330 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 OR9G1Q8NH87 305 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 C7orf33Q8WU49 177 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 ITLN2Q8WWU7 325 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 ISG20Q96AZ6 181 aaKnown RBP3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 CCDC127Q96BQ5 260 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 C19orf60Q96EN9 201 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 FOXC2Q99958 501 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 SH3GL3Q99963 347 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 TMEM246Q9BRR3 403 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 HES7Q9BYE0 225 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 ING2Q9H160 280 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 SIAEQ9HAT2 523 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 FANCEQ9HB96 536 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 AGPAT3Q9NRZ7 376 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 QPCTLQ9NXS2 382 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 GNPTGQ9UJJ9 305 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 MRPS18BQ9Y676 258 aaKnown RBP3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 CDH10Q9Y6N8 788 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 NCOA6Q14686 2063 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 ABCA4P78363 2273 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 JMJD1CQ15652 2540 aa3.65□□□□□ -1.83
TRAPPC9-216ENST00000634178 CACNA1CQ13936 2221 aa3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 DOCK4Q8N1I0 1966 aa3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 RBMY1BA6NDE4 496 aaKnown RBP3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 RBMY1EA6NEQ0 496 aaKnown RBP3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 ZFP92A6NM28 416 aa3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 SUPT3HB4E1H0 165 aa3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 C12orf77C9JDV5 145 aa3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 F5H5T6 163 aa3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 GOLGA8TH3BQL2 631 aa3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 TOX3O15405 576 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 CLDN11O75508 207 aa3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 EEDO75530 441 aaKnown RBP3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 EIF3GO75821 320 aaKnown RBP eCLIP3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 IGLV3-25P01717 112 aa3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 APOEP02649 317 aa3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 RBMY1DP0C7P1 496 aaKnown RBP3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 RBMY1A1P0DJD3 496 aaKnown RBP3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 HTR1EP28566 365 aa3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 GPR6P46095 362 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 SUB1P53999 127 aaKnown RBP eCLIP3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 APOC4P55056 127 aa3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 LIPEQ05469 1076 aa3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 ADIGQ0VDE8 80 aa3.64□□□□□ -1.83
TRAPPC9-216ENST00000634178 CASC10Q5T4H9 136 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms