RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 TOR2AQ5JU69 321 aa10.61□□□□□ -0.71
SHPRH-211ENST00000629427 RPUSD3Q6P087 351 aaKnown RBP10.61□□□□□ -0.71
SHPRH-211ENST00000629427 GNRHR2Q96P88 292 aa10.61□□□□□ -0.71
SHPRH-211ENST00000629427 SCPEP1Q9HB40 452 aa10.61□□□□□ -0.71
SHPRH-211ENST00000629427 POMT2Q9UKY4 750 aa10.61□□□□□ -0.71
SHPRH-211ENST00000629427 TMEM129A0AVI4 362 aa10.61□□□□□ -0.71
SHPRH-211ENST00000629427 GABRG2P18507 467 aa10.61□□□□□ -0.71
SHPRH-211ENST00000629427 TEX101Q9BY14 249 aa10.61□□□□□ -0.71
SHPRH-211ENST00000629427 GSG1Q2KHT4 349 aa10.61□□□□□ -0.71
SHPRH-211ENST00000629427 CD276Q5ZPR3 534 aa10.61□□□□□ -0.71
SHPRH-211ENST00000629427 SPACA9Q96E40 222 aaPredicted RBP10.61□□□□□ -0.71
SHPRH-211ENST00000629427 LRFN3Q9BTN0 628 aa10.61□□□□□ -0.71
SHPRH-211ENST00000629427 ISG20L2Q9H9L3 353 aaKnown RBP10.61□□□□□ -0.71
SHPRH-211ENST00000629427 SLCO1C1Q9NYB5 712 aa10.61□□□□□ -0.71
SHPRH-211ENST00000629427 LAMP3Q9UQV4 416 aa10.61□□□□□ -0.71
SHPRH-211ENST00000629427 NUDT19A8MXV4 375 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 K7EQS6 105 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 TNFRSF1AP19438 455 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 POU3F3P20264 500 aaPredicted RBP10.6□□□□□ -0.71
SHPRH-211ENST00000629427 RAB1AP62820 205 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 SLC17A1Q14916 467 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 XKR7Q5GH72 579 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 C1orf210Q8IVY1 113 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 RPUSD4Q96CM3 377 aaKnown RBP10.6□□□□□ -0.71
SHPRH-211ENST00000629427 CIB3Q96Q77 187 aaPredicted RBP10.6□□□□□ -0.71
SHPRH-211ENST00000629427 CLEC5AQ9NY25 188 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 MPLP40238 635 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 HFEQ30201 348 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 SYT6Q5T7P8 510 aaPredicted RBP10.6□□□□□ -0.71
SHPRH-211ENST00000629427 H3F3CQ6NXT2 135 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 ARHGEF39Q8N4T4 335 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 CLEC18AA5D8T8 446 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 IGLV3-27P01718 113 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 MBP02144 154 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 DIO1P49895 249 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 FUT6P51993 359 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 CLEC18CQ8NCF0 446 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 ST8SIA2Q92186 375 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 GNPNAT1Q96EK6 184 aaPredicted RBP10.6□□□□□ -0.71
SHPRH-211ENST00000629427 MAP1BP46821 2468 aaKnown RBP10.6□□□□□ -0.71
SHPRH-211ENST00000629427 TRAV17A0A0B4J275 112 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 A0A1W2PR80 420 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 FAAP20Q6NZ36 180 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 OR10V1Q8NGI7 309 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 OR10Z1Q8NGY1 313 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 LILRB4Q8NHJ6 448 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 CCL17Q92583 94 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 SMIM19Q96E16 107 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 MYOFQ9NZM1 2061 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 ITGBL1O95965 494 aaPredicted RBP10.6□□□□□ -0.71
SHPRH-211ENST00000629427 FAHP16930 419 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 BMP5P22003 454 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 C11orf42Q8N5U0 333 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 CLDN23Q96B33 292 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 A0A0B4J203 849 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 ZNF727A8MUV8 499 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 E5RGE8 158 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 MEOX1P50221 254 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 LYSMD2Q8IV50 215 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 NUDCD2Q8WVJ2 157 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 PELI1Q96FA3 418 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 NSG2Q9Y328 171 aa10.6□□□□□ -0.71
SHPRH-211ENST00000629427 ADAM10O14672 748 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 TAAR5O14804 337 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 SLC25A4P12235 298 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 SLC6A12P48065 614 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 HYAL1Q12794 435 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 AGERQ15109 404 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 MICBQ29980 383 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 PAQR6Q6TCH4 344 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 ADPRHL1Q8NDY3 354 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 CMBLQ96DG6 245 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 MAGT1Q9H0U3 335 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 DNASE2O00115 360 aaPredicted RBP10.59□□□□□ -0.71
SHPRH-211ENST00000629427 HPP00738 406 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 DGCR2P98153 550 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 TMEM65Q6PI78 240 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 MFSD4AQ8N468 514 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 FAM26EQ8N5C1 309 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 RBPMSQ93062 196 aaKnown RBP10.59□□□□□ -0.71
SHPRH-211ENST00000629427 AAMDCQ9H7C9 122 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 MYOZ1Q9NP98 299 aaPredicted RBP10.59□□□□□ -0.71
SHPRH-211ENST00000629427 RGPD4Q7Z3J3 1758 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 PAPPA2Q9BXP8 1791 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 UMAD1C9J7I0 102 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 ARRB2P32121 409 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 IL11RAQ14626 422 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 ZNF416Q9BWM5 594 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 SULT1C4O75897 302 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 TOX4O94842 621 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 PDGFBP01127 241 aaPredicted RBP10.59□□□□□ -0.71
SHPRH-211ENST00000629427 MRPL58Q14197 206 aaKnown RBP10.59□□□□□ -0.71
SHPRH-211ENST00000629427 RNPS1Q15287 305 aaKnown RBP10.59□□□□□ -0.71
SHPRH-211ENST00000629427 ZNF239Q16600 458 aaKnown RBP10.59□□□□□ -0.71
SHPRH-211ENST00000629427 PRR7Q8TB68 274 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 SCARB1Q8WTV0 552 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 APOBEC3DQ96AK3 386 aaPredicted RBP10.59□□□□□ -0.71
SHPRH-211ENST00000629427 CASP8AP2Q9UKL3 1982 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 CKAP5Q14008 2032 aa10.59□□□□□ -0.71
SHPRH-211ENST00000629427 UBE2L5PA0A1B0GUS4 154 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms