RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 LOC102723971A0A1B0GUV8 181 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 DAPL1A0PJW8 107 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 M0QYG6 137 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 KRT8P05787 483 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 SAGP10523 405 aaPredicted RBP4.2□□□□□ -1.74
LINC00550-201ENST00000629293 TFPIP10646 304 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 CLUP10909 449 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF3P17036 446 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 ELK1P19419 428 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 PSMB1P20618 241 aaKnown RBP4.2□□□□□ -1.74
LINC00550-201ENST00000629293 SLC6A6P31641 620 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 RCVRNP35243 200 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 ATP6V1E1P36543 226 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 FOXF1Q12946 379 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 TMEM249Q2WGJ8 235 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 FCRLAQ7L513 359 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 SSX6Q7RTT6 188 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 TPRA1Q86W33 373 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 LRRC28Q86X40 367 aaPredicted RBP4.2□□□□□ -1.74
LINC00550-201ENST00000629293 CDK20Q8IZL9 346 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 TCTE3Q8IZS6 198 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 FAM71CQ8NEG0 241 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 RPS4Y2Q8TD47 263 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 DDOQ99489 341 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 NOX1Q9Y5S8 564 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 PKD1L1Q8TDX9 2849 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 CR1P17927 2039 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 FAM172BPA6NC97 362 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 DPRXA6NFQ7 191 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 ANKRD61A6NGH8 418 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 OGG1O15527 345 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 LYRM1O43325 122 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 IDH3BO43837 385 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 CD5LO43866 347 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 TFP02787 698 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 DANCRP0C864 163 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 EDNRAP25101 427 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 SPOCK1Q08629 439 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 PPA1Q15181 289 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 QPRTQ15274 297 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 NDUFA5Q16718 116 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 KRTAP24-1Q3LI83 254 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF672Q499Z4 452 aaPredicted RBP4.2□□□□□ -1.74
LINC00550-201ENST00000629293 ZFP69Q49AA0 526 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 TRIQKQ629K1 86 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF529Q6P280 563 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 SFXN4Q6P4A7 337 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 CBLN3Q6UW01 205 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 BHLHA15Q7RTS1 189 aaPredicted RBP4.2□□□□□ -1.74
LINC00550-201ENST00000629293 OAFQ86UD1 273 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 RFLNBQ8N5W9 214 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 OR10H4Q8NGA5 316 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 OR5J2Q8NH18 312 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 LILRB1Q8NHL6 650 aaPredicted RBP4.2□□□□□ -1.74
LINC00550-201ENST00000629293 UPRTQ96BW1 309 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 KTI12Q96EK9 354 aaPredicted RBP4.2□□□□□ -1.74
LINC00550-201ENST00000629293 C4orf36Q96KX1 117 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 OR5B2Q96R09 309 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 TNFRSF13CQ96RJ3 184 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 GPX7Q96SL4 187 aaPredicted RBP4.2□□□□□ -1.74
LINC00550-201ENST00000629293 TBX5Q99593 518 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 MARVELD1Q9BSK0 173 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 TRAF4Q9BUZ4 470 aaPredicted RBP4.2□□□□□ -1.74
LINC00550-201ENST00000629293 SRXN1Q9BYN0 137 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 NMNAT2Q9BZQ4 307 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 ZCCHC4Q9H5U6 513 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 TMEM165Q9HC07 324 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 MALT1Q9UDY8 824 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 RCE1Q9Y256 329 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 RBMX2Q9Y388 322 aaKnown RBP4.2□□□□□ -1.74
LINC00550-201ENST00000629293 ARFGEF3Q5TH69 2177 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 TRAV1-2A0A0B4J238 106 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 LINC00854A0A1B0GVQ3 168 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 M0R1B8 84 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 SS18L1O75177 396 aaPredicted RBP4.19□□□□□ -1.74
LINC00550-201ENST00000629293 IGF2P01344 180 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 IFNGP01579 166 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 EIF4EP06730 217 aaKnown RBP4.19□□□□□ -1.74
LINC00550-201ENST00000629293 MRPL3P09001 348 aaKnown RBP4.19□□□□□ -1.74
LINC00550-201ENST00000629293 FAM157CP0CG43 387 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 SRD5A1P18405 259 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 NPR2P20594 1047 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF134P52741 427 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 OR10A3P58181 314 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 OR12D2P58182 307 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 IL18Q14116 193 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 CDK10Q15131 360 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 CD226Q15762 336 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 TOMM34Q15785 309 aaPredicted RBP4.19□□□□□ -1.74
LINC00550-201ENST00000629293 ETFDHQ16134 617 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF239Q16600 458 aaKnown RBP4.19□□□□□ -1.74
LINC00550-201ENST00000629293 CDONQ4KMG0 1287 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 KLHL12Q53G59 568 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 ALG10BQ5I7T1 473 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 NCMAPQ5T1S8 102 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 FAM27D1Q5T7N8 215 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 ULK3Q6PHR2 472 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 ARL9Q6T311 187 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 GLCCI1Q86VQ1 547 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 SYS1Q8N2H4 156 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms