RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 PTBP3O95758 552 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 LYNX1P0DP58 116 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 GSK3AP49840 483 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 CDH15P55291 814 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 RAB40BQ12829 278 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 MRPL28Q13084 256 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 KCNJ8Q15842 424 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 GFOD2Q3B7J2 385 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 TMEM155Q4W5P6 130 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 BCL2L15Q5TBC7 163 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 FAM166AQ6J272 317 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 COMMD2Q86X83 199 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 KLHL36Q8N4N3 616 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 DHRSXQ8N5I4 330 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 TEX29Q8N6K0 151 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 ACBD7Q8N6N7 88 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 OR10AD1Q8NGE0 317 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 OR8B12Q8NGG6 310 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 Q8TCH9 128 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 RNFT2Q96EX2 444 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 PBOV1Q9GZY1 135 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 GCM1Q9NP62 436 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 BRD7Q9NPI1 651 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 LPAR3Q9UBY5 353 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 COPS3Q9UNS2 423 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 WIPI2Q9Y4P8 454 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 NPTNQ9Y639 398 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 ZFHX3Q15911 3703 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 CSPG4Q6UVK1 2322 aa11.85□□□□□ -0.51
SNRPA1-216ENST00000626000 TLN2Q9Y4G6 2542 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 ZNF469Q96JG9 3925 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 A0A1W2PQL4 384 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 ERICH4A6NGS2 130 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 METTL15A6NJ78 407 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 A8MV72 311 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 MLNRO43193 412 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 CST4P01036 141 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 IGHV4-31P0DP07 118 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 ZNF12P17014 697 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 CA6P23280 308 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 PEX2P28328 305 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 MDH2P40926 338 aaKnown RBP11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 HCCSP53701 268 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 ELF3P78545 371 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 MED21Q13503 144 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 LRRC36Q1X8D7 754 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 KLHL22Q53GT1 634 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 C6orf52Q5T4I8 152 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 OGFRL1Q5TC84 451 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 ENTHD1Q8IYW4 607 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 GALNT4Q8N4A0 578 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 YIPF7Q8N8F6 280 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 LINC01356Q8N9X3 169 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 MAPK1IP1LQ8NDC0 245 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 C1orf159Q96HA4 380 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 SMR3AQ99954 134 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 GAL3ST1Q99999 423 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 MICU1Q9BPX6 476 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 PAPOLGQ9BWT3 736 aaKnown RBP11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 GSX1Q9H4S2 264 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 KCNS2Q9ULS6 477 aa11.84□□□□□ -0.51
SNRPA1-216ENST00000626000 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.83□□□□□ -0.511e-11■■■■■ 39.6
SNRPA1-216ENST00000626000 NSD1Q96L73 2696 aaPredicted RBP11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 DAPL1A0PJW8 107 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 TMEM210A6NLX4 147 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 F5H5P2 479 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 H0YJX3 145 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 TMEM178BH3BS89 294 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 DBTP11182 482 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 GABRB1P18505 474 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 HNF1AP20823 631 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 BTG1P62324 171 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 ZNF91Q05481 1191 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 SLC34A1Q06495 639 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 RIPPLY1Q0D2K3 151 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 KRT74Q7RTS7 529 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 THAP5Q7Z6K1 395 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 ELMOD2Q8IZ81 293 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 SEMA6DQ8NFY4 1073 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 OR51F2Q8NH61 342 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 CLDND2Q8NHS1 167 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 HIST1H2AAQ96QV6 131 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 RTL8AQ9BWD3 113 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 YAE1D1Q9NRH1 226 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 MRPS18AQ9NVS2 196 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 MRM2Q9UI43 246 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 GTF2A1LQ9UNN4 478 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 EXOGQ9Y2C4 368 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 DYSFO75923 2080 aa11.83□□□□□ -0.52
SNRPA1-216ENST00000626000 ZNF816-ZNF321PA0A0X1KG74 233 aa11.82□□□□□ -0.52
SNRPA1-216ENST00000626000 LOC100289279A0A1B0GTE1 492 aa11.82□□□□□ -0.52
SNRPA1-216ENST00000626000 ISPDA4D126 451 aa11.82□□□□□ -0.52
SNRPA1-216ENST00000626000 PSMD9O00233 223 aa11.82□□□□□ -0.52
SNRPA1-216ENST00000626000 DHRS3O75911 302 aa11.82□□□□□ -0.52
SNRPA1-216ENST00000626000 HLA-DPB1P04440 258 aa11.82□□□□□ -0.52
SNRPA1-216ENST00000626000 UBCP0CG48 685 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-216ENST00000626000 DVL1P1P54792 670 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-216ENST00000626000 MVKQ03426 396 aa11.82□□□□□ -0.52
SNRPA1-216ENST00000626000 KRTAP1-1Q07627 177 aa11.82□□□□□ -0.52
SNRPA1-216ENST00000626000 ZNF684Q5T5D7 378 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms