RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ZNF101Q8IZC7 436 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 C1orf147Q96MC9 270 aaPredicted RBP17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 B4GALT7Q9UBV7 327 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 IL17BQ9UHF5 180 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 HPNP05981 417 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 DBHP09172 617 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 THBS4P35443 961 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 RAB35Q15286 201 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 OR1C1Q15619 314 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 CDNFQ49AH0 187 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 NLRC3Q7RTR2 1065 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 CCDC54Q8NEL0 328 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 CMBLQ96DG6 245 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 ZNF845Q96IR2 970 aaPredicted RBP17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 ZNF736B4DX44 427 aaPredicted RBP17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 SGCEO43556 437 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 RLN1P04808 185 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 PRF1P14222 555 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 CRYGSP22914 178 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 OR3A4PP47883 348 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 FAM209AQ5JX71 171 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 FJX1Q86VR8 437 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 ZNF584Q8IVC4 421 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 SULF2Q8IWU5 870 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 GALNT16Q8N428 558 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 CHST4Q8NCG5 386 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 OR10R2Q8NGX6 335 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 KCNG3Q8TAE7 436 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 ALKBH3Q96Q83 286 aaPredicted RBP17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 HES7Q9BYE0 225 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 FAM86C1Q9NVL1 165 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 SYNGR3O43761 229 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 ITGB2P05107 769 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 CHRM2P08172 466 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 DNASE1P24855 282 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 PP6455Q8WZ26 134 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 C10orf35Q96D05 121 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 LRFN3Q9BTN0 628 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 TINAGL1Q9GZM7 467 aaPredicted RBP17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 LPAR5Q9H1C0 372 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 MGAT4CQ9UBM8 478 aa17.28■□□□□ 0.36
PCDHB11-202ENST00000624887 M0QYG6 137 aa17.27■□□□□ 0.36
PCDHB11-202ENST00000624887 UBBP0CG47 229 aa17.27■□□□□ 0.36
PCDHB11-202ENST00000624887 LHX2P50458 406 aa17.27■□□□□ 0.36
PCDHB11-202ENST00000624887 SCRN3Q0VDG4 424 aa17.27■□□□□ 0.36
PCDHB11-202ENST00000624887 DRAM2Q6UX65 266 aa17.27■□□□□ 0.36
PCDHB11-202ENST00000624887 OR52H1Q8NGJ2 320 aa17.27■□□□□ 0.36
PCDHB11-202ENST00000624887 ABHD3Q8WU67 409 aa17.27■□□□□ 0.36
PCDHB11-202ENST00000624887 SLC25A21Q9BQT8 299 aaPredicted RBP17.27■□□□□ 0.36
PCDHB11-202ENST00000624887 ALX4Q9H161 411 aaPredicted RBP17.27■□□□□ 0.36
PCDHB11-202ENST00000624887 OR10A2Q9H208 303 aa17.27■□□□□ 0.36
PCDHB11-202ENST00000624887 UPB1Q9UBR1 384 aa17.27■□□□□ 0.36
PCDHB11-202ENST00000624887 PCNX2A6NKB5 2137 aa17.27■□□□□ 0.35
PCDHB11-202ENST00000624887 G3V3Q6 166 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 CDC14BO60729 498 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 MTRF1O75570 445 aaKnown RBP17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 AMY2AP04746 511 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 ZNF735P0CB33 412 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 HOXD11P31277 338 aaPredicted RBP17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 RFC3P40938 356 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 LINC00696Q6ZRV3 163 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 TRAPPC6BQ86SZ2 158 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 DTX1Q86Y01 620 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 TMEM104Q8NE00 496 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 OR52B4Q8NGK2 314 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 OR2T35Q8NGX2 323 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 TMEM45BQ96B21 275 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 GPER1Q99527 375 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 FOXB1Q99853 325 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 COL25A1Q9BXS0 654 aaPredicted RBP17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 CHST5Q9GZS9 411 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 EXO5Q9H790 373 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 PLA2G3Q9NZ20 509 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 ZNF224Q9NZL3 707 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 UBE2QL1A1L167 161 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 CELA3AP09093 270 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 B4GALT1P15291 398 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 GNB3P16520 340 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 P2RX3P56373 397 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 CEACAM16Q2WEN9 425 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 SNAI3Q3KNW1 292 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 IDO2Q6ZQW0 420 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 CHMP1BQ7LBR1 199 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 DEFB124Q8NES8 71 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 OR1F12Q8NHA8 337 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 FER1L6-AS2Q96M78 137 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 GPR137Q96N19 417 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 NICN1Q9BSH3 213 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 TTTY12Q9BZ98 90 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 SELENOIQ9C0D9 397 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 GPR35Q9HC97 309 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 CA10Q9NS85 328 aa17.26■□□□□ 0.35
PCDHB11-202ENST00000624887 RTTNQ86VV8 2226 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 IGKV3D-15A0A087WSY6 115 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 A0A0A6YYD4 124 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 ERVH48-1M5A8F1 160 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 MPIG6BO95866 241 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 GIPP09681 153 aaPredicted RBP17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 FAHP16930 419 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 NBL1P41271 181 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms