RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 GSTP1P09211 210 aaKnown RBP14.29□□□□□ -0.12
LDB3-208ENST00000623007 TBPP20226 339 aa14.29□□□□□ -0.12
LDB3-208ENST00000623007 MPGP29372 298 aa14.29□□□□□ -0.12
LDB3-208ENST00000623007 EFNB2P52799 333 aa14.29□□□□□ -0.12
LDB3-208ENST00000623007 QRFPP83859 136 aa14.29□□□□□ -0.12
LDB3-208ENST00000623007 ARF1P84077 181 aaKnown RBP14.29□□□□□ -0.12
LDB3-208ENST00000623007 TGFBR3Q03167 851 aa14.29□□□□□ -0.12
LDB3-208ENST00000623007 ZMYND11Q15326 602 aa14.29□□□□□ -0.12
LDB3-208ENST00000623007 RBMS2Q15434 407 aaKnown RBP14.29□□□□□ -0.12
LDB3-208ENST00000623007 GFOD2Q3B7J2 385 aa14.29□□□□□ -0.12
LDB3-208ENST00000623007 P4HA3Q7Z4N8 544 aa14.29□□□□□ -0.12
LDB3-208ENST00000623007 TCTE3Q8IZS6 198 aa14.29□□□□□ -0.12
LDB3-208ENST00000623007 SGK3Q96BR1 496 aa14.29□□□□□ -0.12
LDB3-208ENST00000623007 POM121Q96HA1 1249 aa14.29□□□□□ -0.12
LDB3-208ENST00000623007 KCNMB2Q9Y691 235 aa14.29□□□□□ -0.12
LDB3-208ENST00000623007 FRYLO94915 3013 aa14.29□□□□□ -0.12
LDB3-208ENST00000623007 OR14I1A6ND48 311 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 J3QW42 95 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 ZNF780AO75290 641 aaPredicted RBP14.28□□□□□ -0.12
LDB3-208ENST00000623007 CYB5AP00167 134 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 TMIGD3P0DMS9 266 aaPredicted RBP14.28□□□□□ -0.12
LDB3-208ENST00000623007 SDHBP21912 280 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 MECP2P51608 486 aaKnown RBP14.28□□□□□ -0.12
LDB3-208ENST00000623007 MEF2DQ14814 521 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 KISS1Q15726 138 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 ZFP69Q49AA0 526 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 RNASE12Q5GAN4 147 aaKnown RBP14.28□□□□□ -0.12
LDB3-208ENST00000623007 FBXW9Q5XUX1 488 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 CD276Q5ZPR3 534 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 OR2A2Q6IF42 318 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 FTMTQ8N4E7 242 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 OR56B1Q8NGI3 324 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 SPSB4Q96A44 273 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 LYZL4Q96KX0 146 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 C1QTNF5Q9BXJ0 243 aa14.28□□□□□ -0.12
LDB3-208ENST00000623007 GPN1Q9HCN4 374 aaPredicted RBP14.28□□□□□ -0.12
LDB3-208ENST00000623007 SS18L1O75177 396 aaPredicted RBP14.27□□□□□ -0.12
LDB3-208ENST00000623007 TGM6O95932 706 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 MT-ND4P03905 459 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 VSIG8P0DPA2 414 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 HOXB1P14653 301 aaPredicted RBP14.27□□□□□ -0.12
LDB3-208ENST00000623007 STOMP27105 288 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 AGTR1P30556 359 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 MALLQ13021 153 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 PPA1Q15181 289 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 PNLIPRP3Q17RR3 467 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 DEFB109BQ30KR1 87 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 PABPC1L2AQ5JQF8 200 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 METTL11BQ5VVY1 283 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 GLIPR1L1Q6UWM5 242 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 LHFPL2Q6ZUX7 228 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 AQP3Q92482 292 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 C20orf85Q9H1P6 137 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 MED28Q9H204 178 aa14.27□□□□□ -0.12
LDB3-208ENST00000623007 NCOA6Q14686 2063 aaPredicted RBP14.27□□□□□ -0.13
LDB3-208ENST00000623007 MYO15AQ9UKN7 3530 aa14.27□□□□□ -0.13
LDB3-208ENST00000623007 MED12Q93074 2177 aa14.27□□□□□ -0.13
LDB3-208ENST00000623007 MED13Q9UHV7 2174 aa14.27□□□□□ -0.13
LDB3-208ENST00000623007 A0A0B4J293 547 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 RAB27BO00194 218 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 NDUFB6O95139 128 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 NAT2P11245 290 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 PTGFRP43088 359 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 CBX5P45973 191 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 OR3A2P47893 321 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 MAB21L1Q13394 359 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 CARTPTQ16568 116 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 CLVS2Q5SYC1 327 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 COLCA1Q6ZS62 124 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 OR10R2Q8NGX6 335 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 ST6GAL2Q96JF0 529 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 SLC25A21Q9BQT8 299 aaPredicted RBP14.26□□□□□ -0.13
LDB3-208ENST00000623007 TMEM59Q9BXS4 323 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 MCUBQ9NWR8 336 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 PTTG3PQ9NZH4 202 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 ZNF224Q9NZL3 707 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 SPRR3Q9UBC9 169 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 LIPGQ9Y5X9 500 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 A0A1B0GUH1 482 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 SNAPC5O75971 98 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 KDM4BO94953 1096 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 IL5P05113 134 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 DBHP09172 617 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 GTF2F2P13984 249 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 OR8B8Q15620 311 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 SNAI3Q3KNW1 292 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 ZNF260Q3ZCT1 412 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 ATAD3CQ5T2N8 411 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 TMEM42Q69YG0 159 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 ZNF584Q8IVC4 421 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 AKR7LQ8NHP1 331 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 APOBEC3DQ96AK3 386 aaPredicted RBP14.26□□□□□ -0.13
LDB3-208ENST00000623007 SEH1LQ96EE3 360 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.26□□□□□ -0.13
LDB3-208ENST00000623007 SLC7A11Q9UPY5 501 aa14.26□□□□□ -0.13
LDB3-208ENST00000623007 MUC6Q6W4X9 2439 aa14.25□□□□□ -0.13
LDB3-208ENST00000623007 TRAV6A0A075B6T7 132 aa14.25□□□□□ -0.13
LDB3-208ENST00000623007 AHRRA9YTQ3 701 aa14.25□□□□□ -0.13
LDB3-208ENST00000623007 CDC14BO60729 498 aa14.25□□□□□ -0.13
LDB3-208ENST00000623007 FAPQ12884 760 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms