RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 GHRLQ9UBU3 117 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 V9GYS6 101 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 DBX1A6NMT0 343 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 C9J4A7 227 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 MLF1P58340 268 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 ECH1Q13011 328 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 PPP1R1AQ13522 171 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 RSPO1Q2MKA7 263 aaPredicted RBP8.3□□□□□ -1.08
PDPN-212ENST00000621990 RFPL4BQ6ZWI9 263 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 FAM57BQ71RH2 274 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 ZNF101Q8IZC7 436 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 BEST3Q8N1M1 668 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 GJC3Q8NFK1 279 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 OR9K2Q8NGE7 335 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 MAFAQ8NHW3 353 aaPredicted RBP8.3□□□□□ -1.08
PDPN-212ENST00000621990 MR1Q95460 341 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 INTS12Q96CB8 462 aaKnown RBP8.3□□□□□ -1.08
PDPN-212ENST00000621990 TMEM41AQ96HV5 264 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 GNRHR2Q96P88 292 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 OCSTAMPQ9BR26 566 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 NARFLQ9H6Q4 476 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 ZNF224Q9NZL3 707 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 ZNF230Q9UIE0 474 aaPredicted RBP8.3□□□□□ -1.08
PDPN-212ENST00000621990 A0A0D9SG52 128 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 MFNGO00587 321 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 EFSO43281 561 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 DNPH1O43598 174 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 CFIP05156 583 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 NAT2P11245 290 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 CCL4P13236 92 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 MGMTP16455 207 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 THBS4P35443 961 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 DUSP3P51452 185 aaPredicted RBP8.3□□□□□ -1.08
PDPN-212ENST00000621990 CSNK2A1P68400 391 aaPredicted RBP8.3□□□□□ -1.08
PDPN-212ENST00000621990 ACTBL2Q562R1 376 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 COMMD2Q86X83 199 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 ZNF283Q8N7M2 679 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 ZIC4Q8N9L1 334 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 CCDC54Q8NEL0 328 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 OR5M9Q8NGP3 310 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 FBXW5Q969U6 566 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 C10orf35Q96D05 121 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 RAB3CQ96E17 227 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 FAM71F1Q96KD3 344 aaPredicted RBP8.3□□□□□ -1.08
PDPN-212ENST00000621990 ZNF385AQ96PM9 386 aaKnown RBP8.3□□□□□ -1.08
PDPN-212ENST00000621990 SPACA5Q96QH8 159 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 CDX2Q99626 313 aaPredicted RBP8.3□□□□□ -1.08
PDPN-212ENST00000621990 NAA11Q9BSU3 229 aaPredicted RBP8.3□□□□□ -1.08
PDPN-212ENST00000621990 TMEM59Q9BXS4 323 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 TNFSF18Q9UNG2 199 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 KCNMB2Q9Y691 235 aa8.3□□□□□ -1.08
PDPN-212ENST00000621990 MUC3AQ02505 3323 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 SOCS1O15524 211 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 DUS4LO95620 317 aaKnown RBP8.29□□□□□ -1.08
PDPN-212ENST00000621990 CSN2P05814 226 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 TMEM50BP56557 158 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 ARPC4P59998 168 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 RAC1P63000 192 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 LIN54Q6MZP7 749 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 ALKAL2Q6UX46 152 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 SLC16A14Q7RTX9 510 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 ZNF546Q86UE3 836 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 ARRDC1Q8N5I2 433 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 KCNRGQ8N5I3 272 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 OR56B1Q8NGI3 324 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 OR2I1PQ8NGU4 316 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 LRRC20Q8TCA0 184 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 ZC3H10Q96K80 434 aaKnown RBP8.29□□□□□ -1.08
PDPN-212ENST00000621990 PHB2Q99623 299 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 SDHAF2Q9NX18 166 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 RDH8Q9NYR8 311 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 NOP16Q9Y3C1 178 aaKnown RBP8.29□□□□□ -1.08
PDPN-212ENST00000621990 C5orf63A6NC05 138 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 B8ZZF3 427 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 CBR3O75828 277 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 DHRS3O75911 302 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 OR2F2O95006 317 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 CER1O95813 267 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 MPIG6BO95866 241 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 ZP3P21754 424 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 B3GALT5-AS1P59052 145 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 TAS2R31P59538 309 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 RPS27AP62979 156 aaKnown RBP8.29□□□□□ -1.08
PDPN-212ENST00000621990 BAMBIQ13145 260 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 OR2F1Q13607 317 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 SGCAQ16586 387 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 RAET1LQ5VY80 246 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 C11orf87Q6NUJ2 197 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 RPS19BP1Q86WX3 136 aaKnown RBP8.29□□□□□ -1.08
PDPN-212ENST00000621990 C20orf196Q8IYI0 205 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 EIF4E3Q8N5X7 224 aaKnown RBP8.29□□□□□ -1.08
PDPN-212ENST00000621990 OR4K15Q8NH41 348 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 SUN5Q8TC36 379 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 PP6455Q8WZ26 134 aa8.29□□□□□ -1.08
PDPN-212ENST00000621990 SF3B5Q9BWJ5 86 aaKnown RBP8.29□□□□□ -1.08
PDPN-212ENST00000621990 MED12Q93074 2177 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 A8MXK9 166 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 NPIPA2E9PIF3 369 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 NPIPA3F8WFD2 350 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 DHHO43323 396 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms