RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 GATBO75879 557 aaKnown RBP9.19□□□□□ -0.94
VPS11-208ENST00000621676 PTH2RP49190 550 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 BCAP31P51572 246 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 LIMK1P53667 647 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 PMPCAQ10713 525 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 BAMBIQ13145 260 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 ARFRP1Q13795 201 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 CCDC92Q53HC0 331 aaPredicted RBP9.19□□□□□ -0.94
VPS11-208ENST00000621676 CROCCP3Q8IVE0 287 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 OR52B4Q8NGK2 314 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 PCNPQ8WW12 178 aaKnown RBP9.19□□□□□ -0.94
VPS11-208ENST00000621676 SGK3Q96BR1 496 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 LYZL4Q96KX0 146 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 TMPRSS13Q9BYE2 586 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 TMEM38BQ9NVV0 291 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 IL36RNQ9UBH0 155 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 ZNF891A8MT65 544 aaPredicted RBP9.19□□□□□ -0.94
VPS11-208ENST00000621676 CENPBD1B2RD01 187 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 SOCS1O15524 211 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 IGHV3-13P01766 116 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 IGHV3-7P01780 117 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 YES1P07947 543 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 GTF2F2P13984 249 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 ZP4Q12836 540 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 UBE2V2Q15819 145 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 ATAD3CQ5T2N8 411 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 C5orf46Q6UWT4 87 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 WDYHV1Q96HA8 205 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 TMEM165Q9HC07 324 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 DNAJB11Q9UBS4 358 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 ZNF222Q9UK12 451 aa9.19□□□□□ -0.94
VPS11-208ENST00000621676 IGLV3-32A0A0A0MS00 114 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 GGT3PA6NGU5 568 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 CCNKO75909 580 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 GRPP07492 148 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 ZNF708P17019 499 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 ZNF83P51522 516 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 FAM27E3Q08E93 113 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 GPR176Q14439 515 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 OXA1LQ15070 435 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 POU4F3Q15319 338 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 ZNF544Q6NX49 715 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 ZFP62Q8NB50 900 aaPredicted RBP9.18□□□□□ -0.94
VPS11-208ENST00000621676 OR5T2Q8NGG2 359 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 ASB17Q8WXJ9 295 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 PNPLA2Q96AD5 504 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 MSL2Q9HCI7 577 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 GPR160Q9UJ42 338 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 TMEM272A0A1B0GTI8 110 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 ORC5O43913 435 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 VAMP5O95183 116 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 SIX6O95475 246 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 RAB3AP20336 220 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 GPM6AP51674 278 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 SLC25A53Q5H9E4 307 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 PLCXD3Q63HM9 321 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 Q6ZNX1 250 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 BPIFB2Q8N4F0 458 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 OR56B2PQ8NGI1 322 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 OR5D14Q8NGL3 314 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 CAPSLQ8WWF8 208 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 NABP1Q96AH0 204 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 ADGRG7Q96K78 797 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 CACNG6Q9BXT2 260 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 ZNF275Q9NSD4 429 aaPredicted RBP9.18□□□□□ -0.94
VPS11-208ENST00000621676 SONP18583 2426 aaKnown RBP9.18□□□□□ -0.94
VPS11-208ENST00000621676 UBE2QL1A1L167 161 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 AIPO00170 330 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 CA6P23280 308 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 BDKRB2P30411 391 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 UBE2NP61088 152 aaKnown RBP9.18□□□□□ -0.94
VPS11-208ENST00000621676 GLT8D1Q68CQ7 371 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 KCTD20Q7Z5Y7 419 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 GLRX5Q86SX6 157 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 MDP1Q86V88 176 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 OR1F12Q8NHA8 337 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 HS3ST6Q96QI5 342 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 SP140LQ9H930 580 aa9.18□□□□□ -0.94
VPS11-208ENST00000621676 TRGV8A0A0C4DH27 118 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 IGKV1-9A0A0C4DH69 117 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 MKRN2OSH3BPM6 223 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 GPRIN2O60269 458 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 SC5DO75845 299 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 CD3DP04234 171 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 ANXA7P20073 488 aaKnown RBP9.17□□□□□ -0.94
VPS11-208ENST00000621676 CSRP1P21291 193 aaKnown RBP9.17□□□□□ -0.94
VPS11-208ENST00000621676 PTGS2P35354 604 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 LRRC37A5PQ49AS3 106 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 CCDC58Q4VC31 144 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 TMEM244Q5VVB8 128 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 ZNF554Q86TJ5 538 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 OR1M1Q8NGA1 313 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 OR51T1Q8NGJ9 327 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 SLC6A7Q99884 636 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 WNT5BQ9H1J7 359 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 RANGRFQ9HD47 186 aaPredicted RBP9.17□□□□□ -0.94
VPS11-208ENST00000621676 CHD6Q8TD26 2715 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 ZNF254O75437 659 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 TATDN3Q17R31 274 aa9.17□□□□□ -0.94
VPS11-208ENST00000621676 JMJD6Q6NYC1 403 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms