RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 METTL8Q9H825 291 aaKnown RBP17.33■□□□□ 0.37
PDLIM3-212ENST00000620787 A0A1W2PP11 408 aa17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 FAM157AC9JC47 383 aa17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 RPS2P15880 293 aaKnown RBP17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 ZNF20P17024 532 aa17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 NME2P22392 152 aa17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 MRPS21P82921 87 aaKnown RBP17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 HSF1Q00613 529 aa17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 SWI5Q1ZZU3 235 aa17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 AADACL3Q5VUY0 350 aa17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 H1FNTQ75WM6 255 aaPredicted RBP17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 ZNF441Q8N8Z8 693 aa17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 OR10H5Q8NGA6 315 aa17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 OR5H2Q8NGV7 314 aa17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 OR6S1Q8NH40 331 aa17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 SOX7Q9BT81 388 aa17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 TAF9BQ9HBM6 251 aa17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 OSGIN2Q9Y236 505 aa17.33■□□□□ 0.36
PDLIM3-212ENST00000620787 NPIPB13A6NJU9 1138 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 NPIPB4C9JG80 1138 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 MFNGO00587 321 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 FASLGP48023 281 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 PPM1FP49593 454 aaPredicted RBP17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 SULT1A2P50226 295 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 RBM39Q14498 530 aaKnown RBP17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 Q7L0L9 218 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 ARHGAP5-AS1Q96IT6 56 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 FANCFQ9NPI8 374 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 PLA2G2EQ9NZK7 142 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 DHCR7Q9UBM7 475 aaKnown RBP17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 EXPH5Q8NEV8 1989 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 PMS2P1A4D2B8 440 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 FBXO24O75426 580 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 SERPINA5P05154 406 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 PET100P0DJ07 73 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 PAX6P26367 422 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 P2RY4P51582 365 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 F2RL1P55085 397 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 S100A10P60903 97 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 MFSD8Q8NHS3 518 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 KCNG3Q8TAE7 436 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 SCGB3A2Q96PL1 93 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 TMEM59Q9BXS4 323 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 EGLN1Q9GZT9 426 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 SLC22A11Q9NSA0 550 aa17.32■□□□□ 0.36
PDLIM3-212ENST00000620787 TAAR5O14804 337 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 HKR1P10072 659 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 SNRPEP62304 92 aaKnown RBP17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 EIF5AP63241 154 aaKnown RBP17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 KIAA0895LQ68EN5 471 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 C8orf33Q9H7E9 229 aaPredicted RBP17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 SMCO4Q9NRQ5 59 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 ATXN7L1Q9ULK2 861 aaPredicted RBP17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 TLCD2A6NGC4 264 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 H3BMH7 237 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 AGPAT2O15120 278 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 HTR3BO95264 441 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 AMY2BP19961 511 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 GLRA1P23415 457 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 CD80P33681 288 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 RAB5BP61020 215 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 ECH1Q13011 328 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 TMEM268Q5VZI3 342 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 EIF5AL1Q6IS14 154 aaKnown RBP17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 DHRS11Q6UWP2 260 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 ETV3LQ6ZN32 361 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 OR1N1Q8NGS0 311 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 DAZLQ92904 295 aaKnown RBP17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 NECAB3Q96P71 396 aaPredicted RBP17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 EMC6Q9BV81 110 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 CHST11Q9NPF2 352 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 GSKIPQ9P0R6 139 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 COPS7AQ9UBW8 275 aa17.31■□□□□ 0.36
PDLIM3-212ENST00000620787 ANOS1P23352 680 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 BLKP51451 505 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 TLE3Q04726 772 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 NSDHLQ15738 373 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 C15orf54Q8N8G6 183 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 RHBDD1Q8TEB9 315 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 TMEM234Q8WY98 164 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 PARP11Q9NR21 331 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 KLHL13Q9P2N7 655 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 ASH2LQ9UBL3 628 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 SDCBPO00560 298 aaPredicted RBP17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 GLAP06280 429 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 HOXB5P09067 269 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 ID4P47928 161 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 CCR5P51681 352 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 BIDP55957 195 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 SMAD2Q15796 467 aaKnown RBP17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 TMPRSS9Q7Z410 1059 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 PRSS58Q8IYP2 241 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 OR5B2Q96R09 309 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 SULT4A1Q9BR01 284 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 CACFD1Q9UGQ2 172 aa17.3■□□□□ 0.36
PDLIM3-212ENST00000620787 C2orf72A6NCS6 295 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 LILRA5A6NI73 299 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 ZNF708P17019 499 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 DRD1P21728 446 aa17.29■□□□□ 0.36
PDLIM3-212ENST00000620787 PTAFRP25105 342 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms