RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 MGMTP16455 207 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 TAS2R45P59539 299 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 RAE1P78406 368 aaKnown RBP10.22□□□□□ -0.77
CLIP1-219ENST00000620786 VMA21Q3ZAQ7 101 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 TMEM182Q6ZP80 229 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-219ENST00000620786 OR13C8Q8NGS7 320 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 RPEQ96AT9 228 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 SMIM19Q96E16 107 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 OR2A5Q96R48 311 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 IKZF5Q9H5V7 419 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 MN1Q10571 1320 aaPredicted RBP10.21□□□□□ -0.77
CLIP1-219ENST00000620786 KCNE1BA0A087WTH5 132 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 RPS10-NUDT3A0A1W2PQS6 291 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 GALNSP34059 522 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 BMI1P35226 326 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 RPS10P46783 165 aaKnown RBP10.21□□□□□ -0.77
CLIP1-219ENST00000620786 STAC2Q6ZMT1 411 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 ABI3BPQ7Z7G0 1075 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 AMDHD2Q9Y303 409 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 LRP12Q9Y561 859 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.21□□□□□ -0.77
CLIP1-219ENST00000620786 IGHV5-10-1A0A0J9YXX1 117 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 ARRDC5A6NEK1 342 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 FUT7Q11130 342 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 ADIRFQ15847 76 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 OR2Y1Q8NGV0 311 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 NUDCD2Q8WVJ2 157 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 ALG14Q96F25 216 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 TUBG2Q9NRH3 451 aa10.21□□□□□ -0.77
CLIP1-219ENST00000620786 IGLV3-16A0A075B6K0 115 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 NDUFA6P56556 154 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 GNG3P63215 75 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 CDK5R1Q15078 307 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 C3AR1Q16581 482 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 RHOUQ7L0Q8 258 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 Q8IYB0 196 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 ADPRHL1Q8NDY3 354 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 OR10P1Q8NGE3 313 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 RNF141Q8WVD5 230 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 SOX7Q9BT81 388 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 ISG20L2Q9H9L3 353 aaKnown RBP10.21□□□□□ -0.78
CLIP1-219ENST00000620786 TIMM9Q9Y5J7 89 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 SCN9AQ15858 1988 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 OR10R2Q8NGX6 335 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 OR13G1Q8NGZ3 307 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 COX14Q96I36 57 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 TAF9BQ9HBM6 251 aa10.21□□□□□ -0.78
CLIP1-219ENST00000620786 ZNF705GA8MUZ8 300 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-219ENST00000620786 AVPR2P30518 371 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 UCNP55089 124 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 PPP1CBP62140 327 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 Q56UQ5 140 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 ZNF439Q8NDP4 499 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 STRAPQ9Y3F4 350 aaKnown RBP10.2□□□□□ -0.78
CLIP1-219ENST00000620786 COX7A1P24310 79 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 MAGEA5P43359 124 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 DHODHQ02127 395 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 STPG1Q5TH74 334 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 ZNF774Q6NX45 483 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 AMER3Q8N944 861 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 SFT2D1Q8WV19 159 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 APH1BQ8WW43 257 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 PLPPR2Q96GM1 343 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 A0A0B4J2E0 115 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 A0A1B0GTL3 188 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 A0A1B0GX12 115 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 HOXB3P14651 431 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-219ENST00000620786 YBX1P67809 324 aaKnown RBP10.2□□□□□ -0.78
CLIP1-219ENST00000620786 FCN2Q15485 313 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 PABPC1L2AQ5JQF8 200 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 PRSS42Q7Z5A4 293 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 CCL2P13500 99 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 M6PRP20645 277 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 FMODQ06828 376 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 PRDX4Q13162 271 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 HMGN3Q15651 99 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 CTU2Q2VPK5 515 aaKnown RBP10.2□□□□□ -0.78
CLIP1-219ENST00000620786 MCHR2Q969V1 340 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 ZNF768Q9H5H4 540 aaKnown RBP10.2□□□□□ -0.78
CLIP1-219ENST00000620786 MMP25Q9NPA2 562 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 SERTM2A0A1B0GWG4 89 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 TCRBV5S2A0A599 114 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 FABP7O15540 132 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 COX7A2P2O60397 106 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 SEMG1P04279 462 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 HRH1P35367 487 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 DDOSTP39656 456 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 CASP3P42574 277 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 OR2G2Q8NGZ5 317 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 LRRC29Q8WV35 223 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 CMBLQ96DG6 245 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 DDOQ99489 341 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 RNF167Q9H6Y7 350 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 GLRX2Q9NS18 164 aa10.2□□□□□ -0.78
CLIP1-219ENST00000620786 DNAJB12Q9NXW2 375 aaKnown RBP10.2□□□□□ -0.78
CLIP1-219ENST00000620786 ANGPTL7O43827 346 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 OR5H8P0DN80 308 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 CTRB1P17538 263 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 TGM1P22735 817 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 RPL35P42766 123 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms