RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 IER3P46695 156 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 PLCXD2Q0VAA5 305 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 MYBPHQ13203 477 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 DPY19L2P2Q6ZN68 376 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 PIGCQ92535 297 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM59Q9BXS4 323 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 DNAJC13O75165 2243 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 SHISA7A6NL88 538 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 ADAM20O43506 726 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 ELNP15502 786 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 CSNK1EP49674 416 aaKnown RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 MALLQ13021 153 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 MOB1BQ7L9L4 216 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 NAXDQ8IW45 347 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 SLC46A1Q96NT5 459 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 SYT3Q9BQG1 590 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 C1orf167Q5SNV9 1468 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 HAND1O96004 215 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 OR10J4P0C629 311 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 PDLIM3Q53GG5 364 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 CLEC2AQ6UVW9 174 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 SLC16A11Q8NCK7 471 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 UHRF2Q96PU4 802 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 ARID1AO14497 2285 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 C4orf47A7E2U8 309 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 GPRIN2O60269 458 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 FGF2P09038 288 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 PNLIPRP2P54317 469 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 FFAR4Q5NUL3 377 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 C8orf82Q6P1X6 216 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 PRODH2Q9UF12 536 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 B9D1Q9UPM9 204 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 MEX3AA1L020 520 aaKnown RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 C1QTNF3-AMACRE9PGA6 284 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 GLB1P16278 677 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 IL2RGP31785 369 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 EFNA3P52797 238 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 SLC17A1Q14916 467 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 HES3Q5TGS1 186 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF331Q9NQX6 463 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 TRGC1P0CF51 173 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 MPC1LP0DKB6 136 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 DTYMKP23919 212 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 BLKP51451 505 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 SUSD3Q96L08 255 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 CEP290O15078 2479 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 A8MVM7 634 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 C3P01024 1663 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 HOXC8P31273 242 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 RAE1P78406 368 aaKnown RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 CDK5R1Q15078 307 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 SLC25A19Q9HC21 320 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 LHX3Q9UBR4 397 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 DUSP11O75319 330 aaKnown RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 ZFPL1O95159 310 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 PPOXP50336 477 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 IL10RAQ13651 578 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 STARD4Q96DR4 205 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 R3HDMLQ9H3Y0 253 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 FGF20Q9NP95 211 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 FGF19O95750 216 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 OPN1MWP04001 364 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 CSN3P07498 182 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 OPN1MW2P0DN77 364 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 OPN1MW3P0DN78 364 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM40Q8WWA1 233 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 OR10C1Q96KK4 312 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 GPA33Q99795 319 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 NAA38Q9BRA0 125 aaKnown RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 EMC6Q9BV81 110 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 HRASLS2Q9NWW9 162 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 OR52A1Q9UKL2 312 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 ATP6V1FQ16864 119 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 GPR32P1Q8NGA4 272 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 OR1P1Q8NH06 330 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 SLC35A4Q96G79 324 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 REG4Q9BYZ8 158 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 PHLPP1O60346 1717 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 PRSS47A8MTI9 375 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 VEGFDO43915 354 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 TMPRSS11DO60235 418 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 LSM6P62312 80 aaKnown RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 GRASPQ7Z6J2 395 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 NRSN1Q8IZ57 195 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 OR2T10Q8NGZ9 312 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 FAM122AQ96E09 287 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 ARHGAP5-AS1Q96IT6 56 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 ADAM29Q9UKF5 820 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 C1orf226A1L170 272 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 GYPAP02724 150 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 PIK3IP1Q96FE7 263 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 KIAA0100Q14667 2235 aaKnown RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 A0A1W2PR48 441 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 FOXE1O00358 373 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 RAB31Q13636 194 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 MSMO1Q15800 293 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM35AQ53FP2 167 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 NUDT10Q8NFP7 164 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 C2orf15Q8WU43 125 aaKnown RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 LMAN1LQ9HAT1 526 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms