RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 DANCRP0C864 163 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 FGF5P12034 268 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 CD46P15529 392 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 CFPP27918 469 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 CCKARP32238 428 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 GABRA4P48169 554 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 CLDN2P57739 230 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 TMEM241Q24JQ0 296 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 ZNF705AQ6ZN79 300 aaPredicted RBP9.26□□□□□ -0.93
VPS11-207ENST00000620429 C1orf87Q8N0U7 546 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 ZNF615Q8N8J6 731 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 LFNGQ8NES3 379 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 HAS2Q92819 552 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 TNFRSF14Q92956 283 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 ARRDC3Q96B67 414 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 CD180Q99467 661 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 PCGF1Q9BSM1 259 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 UBE2ZQ9H832 354 aaPredicted RBP9.26□□□□□ -0.93
VPS11-207ENST00000620429 PLSCR2Q9NRY7 297 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 SIDT1Q9NXL6 827 aaKnown RBP9.26□□□□□ -0.93
VPS11-207ENST00000620429 URGCP-MRPS24S4R325 110 aa9.26□□□□□ -0.93
VPS11-207ENST00000620429 MDC1Q14676 2089 aaKnown RBP9.26□□□□□ -0.93
VPS11-207ENST00000620429 PPP5D1E7EU14 171 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 CCL25O15444 150 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 ZIC2O95409 532 aaPredicted RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 PCCBP05166 539 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 CXCR1P25024 350 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 TSFMP43897 325 aaKnown RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 FXYD6P3P58550 94 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 UBE2KP61086 200 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 TRA2BP62995 288 aaKnown RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 HYAL4Q2M3T9 481 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 FAM78AQ5JUQ0 283 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 C1orf185Q5T7R7 199 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 LEG1Q6P5S2 330 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 RFLNBQ8N5W9 214 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 CYB561A3Q8NBI2 242 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 METTL21AQ8WXB1 218 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 PRRT1Q99946 306 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 CSTL1Q9H114 145 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.25□□□□□ -0.93
VPS11-207ENST00000620429 SLC17A5Q9NRA2 495 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 AURKAIP1Q9NWT8 199 aaPredicted RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 OSGIN2Q9Y236 505 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 POLR3KQ9Y2Y1 108 aaPredicted RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 A0A1W2PR48 441 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 C19orf67A6NJJ6 358 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 PEX12O00623 359 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 GEMIN2O14893 280 aaKnown RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 GYPBP06028 91 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 UMODP07911 640 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 MMP7P09237 267 aaPredicted RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 SLC35G6P0C7Q6 338 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 OR2T7P0C7T2 308 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 LIPCP11150 499 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 CSNK2A2P19784 350 aaPredicted RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 MAKP20794 623 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 WNT5AP41221 380 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 PDLIM4P50479 330 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 RAB7AP51149 207 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 POLR2HP52434 150 aaKnown RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 HSF1Q00613 529 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 PSG6Q00889 435 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 GAB4Q2WGN9 574 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 AADACL3Q5VUY0 350 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 RPUSD3Q6P087 351 aaKnown RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 VHLLQ6RSH7 139 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 NOXO1Q8NFA2 376 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 OR2T27Q8NH04 317 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 PFN4Q8NHR9 129 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 ORAOV1Q8WV07 137 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 SMARCD2Q92925 531 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 NUS1Q96E22 293 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 ZNF514Q96K75 400 aaPredicted RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 SPACA7Q96KW9 195 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 SLC6A7Q99884 636 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 AICDAQ9GZX7 198 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 PDE7BQ9NP56 450 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 FOXJ2Q9P0K8 574 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 LUZP4Q9P127 313 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 EYSQ5T1H1 3165 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 LRRK1Q38SD2 2015 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 C5orf67F2Z3F1 127 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 ERI3O43414 337 aaKnown RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 NME2P1O60361 137 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 ZFPL1O95159 310 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 HNRNPA1P09651 372 aaKnown RBP eCLIP9.25□□□□□ -0.93
VPS11-207ENST00000620429 PET100P0DJ07 73 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 NOVA1P51513 510 aaKnown RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 RND2P52198 227 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 C4orf17Q53FE4 359 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 EXOSC6Q5RKV6 272 aaKnown RBP9.25□□□□□ -0.93
VPS11-207ENST00000620429 THSD4Q6ZMP0 1018 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 TMPRSS12Q86WS5 348 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 ZNF563Q8TA94 476 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 ADAMTS15Q8TE58 950 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 LMF1Q96S06 567 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 C20orf144Q9BQM9 153 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 MIEN1Q9BRT3 115 aa9.25□□□□□ -0.93
VPS11-207ENST00000620429 ANGPTL4Q9BY76 406 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms