RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 OR9Q2Q8NGE9 314 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 OR6K6Q8NGW6 343 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 OR2T29Q8NH02 315 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 OR2AE1Q8NHA4 323 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 C12orf43Q96C57 262 aaKnown RBP9.89□□□□□ -0.83
UPF3B-204ENST00000619445 WDFY2Q96P53 400 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 NMNAT2Q9BZQ4 307 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 ACOXLQ9NUZ1 547 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 ZNF391Q9UJN7 358 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 PRPF19Q9UMS4 504 aaKnown RBP9.89□□□□□ -0.83
UPF3B-204ENST00000619445 KPTNQ9Y664 436 aa9.89□□□□□ -0.83
UPF3B-204ENST00000619445 ANXA2P2A6NMY6 339 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 LHBP01229 141 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 GASTP01350 101 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 ANXA2P07355 339 aaKnown RBP9.88□□□□□ -0.83
UPF3B-204ENST00000619445 GRPP07492 148 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 MMP9P14780 707 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 RBMXP38159 391 aaKnown RBP9.88□□□□□ -0.83
UPF3B-204ENST00000619445 RAG2P55895 527 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 PRSS12P56730 875 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 IL5RAQ01344 420 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 SFRP4Q6FHJ7 346 aaPredicted RBP9.88□□□□□ -0.83
UPF3B-204ENST00000619445 BRD3OSQ6XYD6 125 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 DHFR2Q86XF0 187 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 CMTM4Q8IZR5 234 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 GCSAMQ8N6F7 178 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 BOLLQ8N9W6 283 aaKnown RBP9.88□□□□□ -0.83
UPF3B-204ENST00000619445 OR51L1Q8NGJ5 315 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 OR9Q1Q8NGQ5 310 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 TEX47Q8TBZ9 253 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 NPRL2Q8WTW4 380 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 RNF133Q8WVZ7 376 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 LRTOMTQ8WZ04 291 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 DYRK2Q92630 601 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 INTS14Q96SY0 518 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 DNTTIP1Q9H147 329 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 OR10A2Q9H208 303 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 CMC2Q9NRP2 79 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 ARL8BQ9NVJ2 186 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 CTSZQ9UBR2 303 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 SAMHD1Q9Y3Z3 626 aaKnown RBP9.88□□□□□ -0.83
UPF3B-204ENST00000619445 WNK1Q9H4A3 2382 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 TRRAPQ9Y4A5 3859 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 IGHV1-69DA0A0B4J2H0 117 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 CENPVL3A0A0U1RRI6 287 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 A0A1B0GVI7 797 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 DHRS12A0PJE2 317 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 ARRDC5A6NEK1 342 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 FAM181BA6NEQ2 426 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 TBX1O43435 398 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 WIPF1O43516 503 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 IGHV1-69P01742 117 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 RPS27P42677 84 aaKnown RBP9.88□□□□□ -0.83
UPF3B-204ENST00000619445 CX3CR1P49238 355 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 EIF2B1Q14232 305 aaKnown RBP9.88□□□□□ -0.83
UPF3B-204ENST00000619445 TRIM25Q14258 630 aaKnown RBP9.88□□□□□ -0.83
UPF3B-204ENST00000619445 CDONQ4KMG0 1287 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 LCN8Q6JVE9 175 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 CYP2R1Q6VVX0 501 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 BTN2A1Q7KYR7 527 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 SLC16A9Q7RTY1 509 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 DPY19L4Q7Z388 723 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 PIGWQ7Z7B1 504 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 FAM90A1Q86YD7 464 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 ZNF454Q8N9F8 522 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 ZNF511Q8NB15 262 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 OR8D4Q8NGM9 314 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 REEP6Q96HR9 211 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 MICU1Q9BPX6 476 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 DPAGT1Q9H3H5 408 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 NIPAL2Q9H841 368 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 CNTD2Q9H8S5 307 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 MPC1Q9Y5U8 109 aa9.88□□□□□ -0.83
UPF3B-204ENST00000619445 TMEM210A6NLX4 147 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 DVL1O14640 695 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 GYPAP02724 150 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 SFTPBP07988 381 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 MELTFP08582 738 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 MDKP21741 143 aaPredicted RBP9.87□□□□□ -0.83
UPF3B-204ENST00000619445 GSTT1P30711 240 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 FAM3AP98173 230 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 GUCA2AQ02747 115 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 OLFML2AQ68BL7 652 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 METAP1DQ6UB28 335 aaPredicted RBP9.87□□□□□ -0.83
UPF3B-204ENST00000619445 FIP1L1Q6UN15 594 aaKnown RBP9.87□□□□□ -0.83
UPF3B-204ENST00000619445 LDLRAD3Q86YD5 345 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.87□□□□□ -0.83
UPF3B-204ENST00000619445 GALNT4Q8N4A0 578 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 KIR3DL3Q8N743 410 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 SCCPDHQ8NBX0 429 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 PAPD5Q8NDF8 572 aaKnown RBP9.87□□□□□ -0.83
UPF3B-204ENST00000619445 C19orf18Q8NEA5 215 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 OR6N2Q8NGY6 317 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 LRGUKQ96M69 825 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 TBX15Q96SF7 602 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 RTL8AQ9BWD3 113 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 TEX12Q9BXU0 123 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 SIRPDQ9H106 197 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 MARCH7Q9H992 704 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 RPUSD1Q9UJJ7 312 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms