RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 EMC9Q9Y3B6 208 aa18.84■□□□□ 0.61
SGMS1-210ENST00000619438 A8MV72 311 aaPredicted RBP18.83■□□□□ 0.61
SGMS1-210ENST00000619438 XRCC3O43542 346 aa18.83■□□□□ 0.61
SGMS1-210ENST00000619438 H2BFMP0C1H6 154 aa18.83■□□□□ 0.61
SGMS1-210ENST00000619438 TAS2R20P59543 309 aa18.83■□□□□ 0.61
SGMS1-210ENST00000619438 H3F3AP84243 136 aa18.83■□□□□ 0.61
SGMS1-210ENST00000619438 BTN2A1Q7KYR7 527 aa18.83■□□□□ 0.61
SGMS1-210ENST00000619438 NOXA1Q86UR1 476 aa18.83■□□□□ 0.61
SGMS1-210ENST00000619438 PPP1R14AQ96A00 147 aa18.83■□□□□ 0.61
SGMS1-210ENST00000619438 C1orf198Q9H425 327 aa18.83■□□□□ 0.61
SGMS1-210ENST00000619438 FBXL3Q9UKT7 428 aa18.83■□□□□ 0.61
SGMS1-210ENST00000619438 GTF2A1LQ9UNN4 478 aa18.83■□□□□ 0.61
SGMS1-210ENST00000619438 INTS1Q8N201 2190 aaKnown RBP18.83■□□□□ 0.6
SGMS1-210ENST00000619438 DOCK7Q96N67 2140 aa18.83■□□□□ 0.6
SGMS1-210ENST00000619438 TMEM269A0A1B0GVZ9 245 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 SULT2B1O00204 365 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 RGS13O14921 159 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 TNFSF13O75888 250 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 YES1P07947 543 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 GSTT2BP0CG30 244 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 ZNF43P17038 809 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 IGFBP2P18065 325 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 GIFP27352 417 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 SNTB1Q13884 538 aaKnown RBP18.82■□□□□ 0.6
SGMS1-210ENST00000619438 RAB11BQ15907 218 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 ELFN2Q5R3F8 820 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.82■□□□□ 0.6
SGMS1-210ENST00000619438 LINC00346Q8IVM7 164 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 CPNE4Q96A23 557 aaPredicted RBP18.82■□□□□ 0.6
SGMS1-210ENST00000619438 SLAMF6Q96DU3 332 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 FYTTD1Q96QD9 318 aaKnown RBP18.82■□□□□ 0.6
SGMS1-210ENST00000619438 RBM24Q9BX46 236 aaKnown RBP18.82■□□□□ 0.6
SGMS1-210ENST00000619438 GHITMQ9H3K2 345 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 NUDT15Q9NV35 164 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 ING3Q9NXR8 418 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 CSMD1Q96PZ7 3565 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 LOC100289279A0A1B0GTE1 492 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 ANKRD20A5PA0PJZ0 165 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 ZNF814B7Z6K7 855 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 NR2C1P13056 603 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 CD83Q01151 205 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 FBXL19-AS1Q494R0 122 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 RNASE12Q5GAN4 147 aaKnown RBP18.82■□□□□ 0.6
SGMS1-210ENST00000619438 GLT8D1Q68CQ7 371 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 SERPINA12Q8IW75 414 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 ROBO4Q8WZ75 1007 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 STARD4Q96DR4 205 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 DMRTB1Q96MA1 342 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 NIPAL2Q9H841 368 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 FAM206AQ9NX38 181 aa18.82■□□□□ 0.6
SGMS1-210ENST00000619438 A0A0A6YYJ9 748 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 LOC107986453A0A1B0GWG9 222 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 FAM172BPA6NC97 362 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 EIF1BO60739 113 aaKnown RBP18.81■□□□□ 0.6
SGMS1-210ENST00000619438 ITGA5P08648 1049 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 KIR2DL2P43627 348 aaPredicted RBP18.81■□□□□ 0.6
SGMS1-210ENST00000619438 IFITM2Q01629 132 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 POU4F3Q15319 338 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 BCL2L15Q5TBC7 163 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 OLFML2AQ68BL7 652 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 VWA1Q6PCB0 445 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 LRFN4Q6PJG9 635 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 FAM214BQ7L5A3 538 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 ACBD4Q8NC06 268 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 SLC25A28Q96A46 364 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 OR2M2Q96R28 347 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 HRASLSQ9HDD0 168 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 JKAMPQ9P055 326 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 EMC3Q9P0I2 261 aa18.81■□□□□ 0.6
SGMS1-210ENST00000619438 A8MXE2 369 aa18.8■□□□□ 0.6
SGMS1-210ENST00000619438 VAMP5O95183 116 aa18.8■□□□□ 0.6
SGMS1-210ENST00000619438 SSTR2P30874 369 aa18.8■□□□□ 0.6
SGMS1-210ENST00000619438 CAMK2DQ13557 499 aa18.8■□□□□ 0.6
SGMS1-210ENST00000619438 GPAT4Q86UL3 456 aa18.8■□□□□ 0.6
SGMS1-210ENST00000619438 ZNF295-AS1Q8N0V1 137 aa18.8■□□□□ 0.6
SGMS1-210ENST00000619438 OR13C3Q8NGS6 347 aa18.8■□□□□ 0.6
SGMS1-210ENST00000619438 OR56B4Q8NH76 319 aa18.8■□□□□ 0.6
SGMS1-210ENST00000619438 FAM3DQ96BQ1 224 aa18.8■□□□□ 0.6
SGMS1-210ENST00000619438 GMPPAQ96IJ6 420 aaPredicted RBP18.8■□□□□ 0.6
SGMS1-210ENST00000619438 MOB1AQ9H8S9 216 aa18.8■□□□□ 0.6
SGMS1-210ENST00000619438 GLRX2Q9NS18 164 aa18.8■□□□□ 0.6
SGMS1-210ENST00000619438 MCUBQ9NWR8 336 aa18.8■□□□□ 0.6
SGMS1-210ENST00000619438 CSMD2Q7Z408 3487 aa18.8■□□□□ 0.6
SGMS1-210ENST00000619438 LOC390937A0A1W2PQ73 354 aa18.79■□□□□ 0.6
SGMS1-210ENST00000619438 ZNF726A6NNF4 738 aa18.79■□□□□ 0.6
SGMS1-210ENST00000619438 MSTNO14793 375 aa18.79■□□□□ 0.6
SGMS1-210ENST00000619438 C1QBP02746 253 aa18.79■□□□□ 0.6
SGMS1-210ENST00000619438 ERP29P30040 261 aaKnown RBP18.79■□□□□ 0.6
SGMS1-210ENST00000619438 POU3F4P49335 361 aa18.79■□□□□ 0.6
SGMS1-210ENST00000619438 ZNF133P52736 654 aaPredicted RBP18.79■□□□□ 0.6
SGMS1-210ENST00000619438 RAC3P60763 192 aa18.79■□□□□ 0.6
SGMS1-210ENST00000619438 CORO6Q6QEF8 472 aa18.79■□□□□ 0.6
SGMS1-210ENST00000619438 KLHL24Q6TFL4 600 aa18.79■□□□□ 0.6
SGMS1-210ENST00000619438 MED12LQ86YW9 2145 aa18.79■□□□□ 0.6
SGMS1-210ENST00000619438 ELMOD2Q8IZ81 293 aa18.79■□□□□ 0.6
SGMS1-210ENST00000619438 NKAIN3Q8N8D7 197 aa18.79■□□□□ 0.6
SGMS1-210ENST00000619438 OR51D1Q8NGF3 324 aa18.79■□□□□ 0.6
SGMS1-210ENST00000619438 OR6M1Q8NGM8 313 aa18.79■□□□□ 0.6
SGMS1-210ENST00000619438 OR10S1Q8NGN2 331 aa18.79■□□□□ 0.6
SGMS1-210ENST00000619438 SRXN1Q9BYN0 137 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms