RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	MIEF1	Q9NQG6	463 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	KLRF1	Q9NZS2	232 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	EXOG	Q9Y2C4	368 aa	Known RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	KCNE3	Q9Y6H6	103 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	EP300	Q09472	2414 aa	Predicted RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	FAM90A27P	A6NNH2	459 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	ENTPD6	O75354	484 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	GPX5	O75715	221 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	ECD	O95905	644 aa	Predicted RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	RLN2	P04090	185 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	MMP7	P09237	267 aa	Predicted RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	ASAH2B	P0C7U1	165 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	ZNF3	P17036	446 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	APEX1	P27695	318 aa	Known RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	TNFSF8	P32971	234 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	CDH11	P55287	796 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	LSM6	P62312	80 aa	Known RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	OLR1	P78380	273 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	FOXF1	Q12946	379 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	FCN2	Q15485	313 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	SGCB	Q16585	318 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	FAM131A	Q6UXB0	335 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	LUZP2	Q86TE4	346 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	METTL27	Q8N6F8	245 aa	Predicted RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	ARIH2OS	Q8N7S6	290 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	LY6G5B	Q8NDX9	201 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	OR6T1	Q8NGN1	323 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	OR51F2	Q8NH61	342 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	ZNF519	Q8TB69	540 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	ZNF431	Q8TF32	576 aa	Predicted RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	SPSB4	Q96A44	273 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	B3GAT2	Q9NPZ5	323 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322		V9GYH0	126 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	GTF3C1	Q12789	2109 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	IGHV1-18	A0A0C4DH31	117 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	IQCM	A0A1B0GVH7	501 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322		B4DSR2	109 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	NPIPB6	E9PJ23	425 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	PRKY	O43930	277 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	AKR7A3	O95154	331 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	MT-ND5	P03915	603 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	H1F0	P07305	194 aa	Known RBP	4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	OR12D1	P0DN82	309 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	SELE	P16581	610 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	NUP62	P37198	522 aa	Predicted RBP	4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	NCBP2	P52298	156 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	BLVRA	P53004	296 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	FXYD6P3	P58550	94 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	CDC42	P60953	191 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	ZNF155	Q12901	538 aa	Predicted RBP	4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	MLLT11	Q13015	90 aa	Predicted RBP	4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	TNK1	Q13470	666 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	CHRFAM7A	Q494W8	412 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	PDZD11	Q5EBL8	140 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	TEX36	Q5VZQ5	186 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	C16orf54	Q6UWD8	224 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	FBXW12	Q6X9E4	464 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	LCNL1	Q6ZST4	164 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	MUC20	Q8N307	709 aa	Predicted RBP	4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	UXS1	Q8NBZ7	420 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	PROKR2	Q8NFJ6	384 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	OR5D16	Q8NGK9	328 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	OR8D4	Q8NGM9	314 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	OR8J1	Q8NGP2	316 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	OR52J3	Q8NH60	311 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	RBPMS	Q93062	196 aa	Known RBP	4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	S100PBP	Q96BU1	408 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	MRPL48	Q96GC5	212 aa	Known RBP	4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	SLC35G5	Q96KT7	338 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	ZNF582	Q96NG8	517 aa	Predicted RBP	4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	ZNF607	Q96SK3	696 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	PFDN5	Q99471	154 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	PRSS27	Q9BQR3	290 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	C7orf50	Q9BRJ6	194 aa	Known RBP	4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	PLA2G12A	Q9BZM1	189 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	RAB1B	Q9H0U4	201 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	VSX1	Q9NZR4	365 aa	Predicted RBP	4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	MRPL15	Q9P015	296 aa	Known RBP	4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	UPB1	Q9UBR1	384 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	NOSIP	Q9Y314	301 aa	Known RBP	4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	IGF2R	P11717	2491 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	UNC79	Q9P2D8	2635 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	PCNX3	Q9H6A9	2034 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	ALPK2	Q86TB3	2170 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	DHRS7C	A6NNS2	312 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	P2RY10	O00398	339 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	ARPC1B	O15143	372 aa	Known RBP	4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	AMY2A	P04746	511 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	AMY2B	P19961	511 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	GAL	P22466	123 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	SMIM11A	P58511	58 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	NAAA	Q02083	359 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	ZNF91	Q05481	1191 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	HSPB3	Q12988	150 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	MED22	Q15528	200 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	KLK9	Q2XQG4	91 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	PYDC2	Q56P42	97 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	BCL2L15	Q5TBC7	163 aa		4.61	□□□□□ -1.67
CBWD3-215	ENST00000619322	AADACL4	Q5VUY2	407 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms