RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 KCNJ8Q15842 424 aa16.63■□□□□ 0.25
PSPC1-206ENST00000619300 GLIPR1L1Q6UWM5 242 aa16.63■□□□□ 0.25
PSPC1-206ENST00000619300 UTS2BQ765I0 119 aa16.63■□□□□ 0.25
PSPC1-206ENST00000619300 FAM46BQ96A09 425 aa16.63■□□□□ 0.25
PSPC1-206ENST00000619300 FYTTD1Q96QD9 318 aaKnown RBP16.63■□□□□ 0.25
PSPC1-206ENST00000619300 BEX2Q9BXY8 128 aa16.63■□□□□ 0.25
PSPC1-206ENST00000619300 NEK6Q9HC98 313 aa16.63■□□□□ 0.25
PSPC1-206ENST00000619300 POU2F3Q9UKI9 436 aa16.63■□□□□ 0.25
PSPC1-206ENST00000619300 ZNF407Q9C0G0 2248 aa16.63■□□□□ 0.25
PSPC1-206ENST00000619300 ZNF891A8MT65 544 aaPredicted RBP16.62■□□□□ 0.25
PSPC1-206ENST00000619300 RAB27BO00194 218 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 LPLP06858 475 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 FAUP35544 74 aaKnown RBP16.62■□□□□ 0.25
PSPC1-206ENST00000619300 PMP22Q01453 160 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 GSG1Q2KHT4 349 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 DEFB109BQ30KR1 87 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 ZFP69Q49AA0 526 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 ZNF101Q8IZC7 436 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 ACBD4Q8NC06 268 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 DMRTB1Q96MA1 342 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 C20orf85Q9H1P6 137 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 NKIRAS2Q9NYR9 191 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 ZNF224Q9NZL3 707 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 UPB1Q9UBR1 384 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 RIF1Q5UIP0 2472 aaKnown RBP16.62■□□□□ 0.25
PSPC1-206ENST00000619300 MEIS3P1A6NDR6 274 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 OR3A4PP47883 348 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 UBE2V2Q15819 145 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 FAAP20Q6NZ36 180 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 OR2W3Q7Z3T1 314 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 NUFIP2Q7Z417 695 aaKnown RBP16.62■□□□□ 0.25
PSPC1-206ENST00000619300 REEP6Q96HR9 211 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 RNF170Q96K19 258 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 GPER1Q99527 375 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 CHST5Q9GZS9 411 aa16.62■□□□□ 0.25
PSPC1-206ENST00000619300 TP63Q9H3D4 680 aaPredicted RBP16.62■□□□□ 0.25
PSPC1-206ENST00000619300 RTTNQ86VV8 2226 aa16.61■□□□□ 0.25
PSPC1-206ENST00000619300 DHRS7CA6NNS2 312 aa16.61■□□□□ 0.25
PSPC1-206ENST00000619300 SCGNO76038 276 aa16.61■□□□□ 0.25
PSPC1-206ENST00000619300 ACTBP60709 375 aa16.61■□□□□ 0.25
PSPC1-206ENST00000619300 ACTG1P63261 375 aa16.61■□□□□ 0.25
PSPC1-206ENST00000619300 PABPC1L2AQ5JQF8 200 aa16.61■□□□□ 0.25
PSPC1-206ENST00000619300 C9orf135Q5VTT2 229 aa16.61■□□□□ 0.25
PSPC1-206ENST00000619300 CDH24Q86UP0 819 aa16.61■□□□□ 0.25
PSPC1-206ENST00000619300 ZNF100Q8IYN0 542 aa16.61■□□□□ 0.25
PSPC1-206ENST00000619300 SEMA6DQ8NFY4 1073 aa16.61■□□□□ 0.25
PSPC1-206ENST00000619300 C1orf147Q96MC9 270 aaPredicted RBP16.61■□□□□ 0.25
PSPC1-206ENST00000619300 ZMAT3Q9HA38 289 aaKnown RBP16.61■□□□□ 0.25
PSPC1-206ENST00000619300 MOV10Q9HCE1 1003 aaKnown RBP16.61■□□□□ 0.25
PSPC1-206ENST00000619300 DNAJC13O75165 2243 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 PEX14O75381 377 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 TGM6O95932 706 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 GTF2F2P13984 249 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 KISS1Q15726 138 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 TCTE3Q8IZS6 198 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 OR2AE1Q8NHA4 323 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 KCNG3Q8TAE7 436 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 AQP3Q92482 292 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 MED28Q9H204 178 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 OR51J1Q9H342 316 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 ZNF391Q9UJN7 358 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 FLVCR2Q9UPI3 526 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 A0A096LPE4 126 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 TRAV17A0A0B4J275 112 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 A0A1W2PPZ6 126 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 WIPF3A6NGB9 483 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 UBBP0CG47 229 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 AKAIN1P0CW23 69 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 GSK3AP49840 483 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 FOXG1P55316 489 aaPredicted RBP16.6■□□□□ 0.25
PSPC1-206ENST00000619300 LINC00303Q3SY05 128 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 ZNF260Q3ZCT1 412 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 DMRTC1Q5HYR2 192 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 PNLDC1Q8NA58 520 aaKnown RBP16.6■□□□□ 0.25
PSPC1-206ENST00000619300 CPEB3Q8NE35 698 aaKnown RBP16.6■□□□□ 0.25
PSPC1-206ENST00000619300 OR4C16Q8NGL9 310 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 NUDT16L1Q9BRJ7 211 aaKnown RBP16.6■□□□□ 0.25
PSPC1-206ENST00000619300 OR10A4Q9H209 315 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 NOX3Q9HBY0 568 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 ING3Q9NXR8 418 aa16.6■□□□□ 0.25
PSPC1-206ENST00000619300 SLC22A20A6NK97 555 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 IGHG3P01860 377 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 ZNF24P17028 368 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 ACKR3P25106 362 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 RIPPLY1Q0D2K3 151 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 FAPQ12884 760 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 CDNFQ49AH0 187 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 Q6ZTK2 550 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 CHST4Q8NCG5 386 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 TMEM104Q8NE00 496 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 GIMAP1Q8WWP7 306 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 RGCCQ9H4X1 137 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 ATPIF1Q9UII2 106 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 ELF5Q9UKW6 265 aaPredicted RBP16.59■□□□□ 0.25
PSPC1-206ENST00000619300 ZNF175Q9Y473 711 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 KCNMB2Q9Y691 235 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 CELSR3Q9NYQ7 3312 aa16.59■□□□□ 0.25
PSPC1-206ENST00000619300 TMEM235A6NFC5 223 aa16.58■□□□□ 0.25
PSPC1-206ENST00000619300 CEACAM4O75871 244 aa16.58■□□□□ 0.25
PSPC1-206ENST00000619300 NDUFB6O95139 128 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms