RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 MEX3AA1L020 520 aaKnown RBP9.69□□□□□ -0.86
POLR2A-209ENST00000617998 NDUFA2O43678 99 aa9.69□□□□□ -0.86
POLR2A-209ENST00000617998 IFNA1P01562 189 aa9.69□□□□□ -0.86
POLR2A-209ENST00000617998 CHRM2P08172 466 aa9.69□□□□□ -0.86
POLR2A-209ENST00000617998 ATF4P18848 351 aaPredicted RBP9.69□□□□□ -0.86
POLR2A-209ENST00000617998 CLDN20P56880 219 aa9.69□□□□□ -0.86
POLR2A-209ENST00000617998 ETFDHQ16134 617 aa9.69□□□□□ -0.86
POLR2A-209ENST00000617998 FAM74A1Q5RGS3 127 aa9.69□□□□□ -0.86
POLR2A-209ENST00000617998 OR2AE1Q8NHA4 323 aa9.69□□□□□ -0.86
POLR2A-209ENST00000617998 CBLN4Q9NTU7 201 aa9.69□□□□□ -0.86
POLR2A-209ENST00000617998 PLXNA1Q9UIW2 1896 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 ACHEP22303 614 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 USF1P22415 310 aaPredicted RBP9.68□□□□□ -0.86
POLR2A-209ENST00000617998 NSUN5P1Q3KNT7 163 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 Q6ZSR9 355 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 OR10V1Q8NGI7 309 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 HPSE2Q8WWQ2 592 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 TRIM63Q969Q1 353 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 KIAA1217Q5T5P2 1943 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 A0A1W2PQD3 144 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 HPRP00739 348 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 WNT3P56703 355 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 PRDX4Q13162 271 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 ACSF3Q4G176 576 aaPredicted RBP9.68□□□□□ -0.86
POLR2A-209ENST00000617998 FAHD1Q6P587 224 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 OR4S1Q8NGB4 309 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 CNIH3Q8TBE1 160 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 SAT2Q96F10 170 aaPredicted RBP9.68□□□□□ -0.86
POLR2A-209ENST00000617998 IGFBP1P08833 259 aaPredicted RBP9.68□□□□□ -0.86
POLR2A-209ENST00000617998 CT62P0C5K7 136 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 HTR2CP28335 458 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 ALKBH1Q13686 389 aaKnown RBP9.68□□□□□ -0.86
POLR2A-209ENST00000617998 OR2B11Q5JQS5 317 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 ANGPTL5Q86XS5 388 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 WDR12Q9GZL7 423 aaKnown RBP9.68□□□□□ -0.86
POLR2A-209ENST00000617998 NLKQ9UBE8 527 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 SELENOPP49908 381 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 ELF3P78545 371 aaPredicted RBP9.68□□□□□ -0.86
POLR2A-209ENST00000617998 ZNF91Q05481 1191 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 RAB40BQ12829 278 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 CATSPERDQ86XM0 798 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 FAM58AQ8N1B3 248 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 GRPEL2Q8TAA5 225 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 TSNAXQ99598 290 aaKnown RBP9.68□□□□□ -0.86
POLR2A-209ENST00000617998 SPSB2Q99619 263 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 HILPDAQ9Y5L2 63 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 GMEB1Q9Y692 573 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 RP1P56715 2156 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 ZNF736B4DX44 427 aaPredicted RBP9.68□□□□□ -0.86
POLR2A-209ENST00000617998 ARPC3O15145 178 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 CLDN1O95832 211 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 NAT2P11245 290 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 TGM1P22735 817 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 RPL5P46777 297 aaKnown RBP9.68□□□□□ -0.86
POLR2A-209ENST00000617998 FUT7Q11130 342 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 TMEM81Q6P7N7 255 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 SLC38A6Q8IZM9 456 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 OR10K1Q8NGX5 313 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 C8orf46Q8TAG6 207 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 PAQR8Q8TEZ7 354 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 TMEM106AQ96A25 262 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 FBXO7Q9Y3I1 522 aa9.68□□□□□ -0.86
POLR2A-209ENST00000617998 NTN3O00634 580 aaPredicted RBP9.67□□□□□ -0.86
POLR2A-209ENST00000617998 FBP1P09467 338 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 PTGFRP43088 359 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 TRAT1Q6PIZ9 186 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 ZNF721Q8TF20 911 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 WACQ9BTA9 647 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 MRPL15Q9P015 296 aaKnown RBP9.67□□□□□ -0.86
POLR2A-209ENST00000617998 RNF24Q9Y225 148 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 RCE1Q9Y256 329 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 NGFP01138 241 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 WNT4P56705 351 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 OR10A3P58181 314 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 NKAIN3Q8N8D7 197 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 SNAPC3Q92966 411 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 SBF1O95248 1867 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 KIAA1551Q9HCM1 1747 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 GPRIN2O60269 458 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 SASH3O75995 380 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 HSD17B1P14061 328 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 CD80P33681 288 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 BSPH1Q075Z2 132 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 ANKRD13BQ86YJ7 626 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 PBOV1Q9GZY1 135 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 ZCCHC4Q9H5U6 513 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 PRSS50Q9UI38 385 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 LMX1BO60663 402 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 HOXB1P14653 301 aaPredicted RBP9.67□□□□□ -0.86
POLR2A-209ENST00000617998 Q6ZPB1 254 aaPredicted RBP9.67□□□□□ -0.86
POLR2A-209ENST00000617998 NEIL1Q96FI4 390 aaPredicted RBP9.67□□□□□ -0.86
POLR2A-209ENST00000617998 SIRT3Q9NTG7 399 aaPredicted RBP9.67□□□□□ -0.86
POLR2A-209ENST00000617998 LSM5Q9Y4Y9 91 aaKnown RBP9.67□□□□□ -0.86
POLR2A-209ENST00000617998 RAB7AP51149 207 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 ARF6P62330 175 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 LSM11P83369 360 aaKnown RBP eCLIP9.67□□□□□ -0.86
POLR2A-209ENST00000617998 ATXN7L3Q14CW9 347 aaPredicted RBP9.67□□□□□ -0.86
POLR2A-209ENST00000617998 LRRC37A5PQ49AS3 106 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 RNF220Q5VTB9 566 aa9.67□□□□□ -0.86
POLR2A-209ENST00000617998 SIRT5Q9NXA8 310 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms