RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 PTPN13Q12923 2485 aa13.15□□□□□ -0.31
TNFRSF11A-206ENST00000617039 MAP1AP78559 2803 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 FABP6P51161 128 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 RNF144BQ7Z419 303 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 RTN4RL2Q86UN3 420 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 CDC20BQ86Y33 519 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 RNF128Q8TEB7 428 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OXGR1Q96P68 337 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 CCDC187A0A096LP49 1063 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OGG1O15527 345 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TPOP07202 933 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 STARD6P59095 220 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 AIMP2Q13155 320 aaKnown RBP13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 PXKQ7Z7A4 578 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 CPT1CQ8TCG5 803 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 PSD2Q9BQI7 771 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TMEM231Q9H6L2 316 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TREM2Q9NZC2 230 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 NUP50Q9UKX7 468 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 BOKQ9UMX3 212 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 LNP1A1A4G5 178 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 B8ZZF3 427 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 K7ESF4 209 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 HLA-DQB1P01920 261 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 SLC6A1P30531 599 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 EIF1P41567 113 aaKnown RBP13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OR1C1Q15619 314 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 THEM4Q5T1C6 240 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 STPG1Q5TH74 334 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 DNASE2BQ8WZ79 361 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 INTS12Q96CB8 462 aaKnown RBP13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 WDFY2Q96P53 400 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 FAAP24Q9BTP7 215 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TAS2R8Q9NYW2 309 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 PILRBQ9UKJ0 227 aa13.14□□□□□ -0.31
TNFRSF11A-206ENST00000617039 DIRAS3O95661 229 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 RLN2P04090 185 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 UBCP0CG48 685 aaKnown RBP13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 PPIAP62937 165 aaKnown RBP13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 EGR3Q06889 387 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 FBXW12Q6X9E4 464 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 NLRC3Q7RTR2 1065 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TMEM200AQ86VY9 491 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OR51F2Q8NH61 342 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 HINT2Q9BX68 163 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 HRH4Q9H3N8 390 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OBP2BQ9NPH6 170 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 NPAP1Q9NZP6 1156 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 UBE2J1Q9Y385 318 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 SETD2Q9BYW2 2564 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ANKRD34BA5PLL1 514 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 LYPD3O95274 346 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 BDH1Q02338 343 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 PGAP1Q75T13 922 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OR2Y1Q8NGV0 311 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 SLC25A38Q96DW6 304 aa13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ZNF629Q9UEG4 869 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF11A-206ENST00000617039 SLC17A2O00624 439 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 FADS1O60427 444 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ADAP1O75689 374 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 LYZL6O75951 148 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 IFNA21P01568 189 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 EXT1Q16394 746 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 PLPP5Q8NEB5 264 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 NOXO1Q8NFA2 376 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 PHB2Q99623 299 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 NTMQ9P121 344 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 NPIPB9F8W1W9 429 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 NR2C1P13056 603 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 MGMTP16455 207 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 GLP1RP43220 463 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 BTN1A1Q13410 526 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 EMC4Q5J8M3 183 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TUSC5Q8IXB3 177 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TMEM217Q8N7C4 229 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TMEM185AQ8NFB2 350 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TRAV1-2A0A0B4J238 106 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 SELEP16581 610 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 RBM39Q14498 530 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 HLXQ14774 488 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 SLC25A30Q5SVS4 291 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 FBXL14Q8N1E6 418 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ZNF454Q8N9F8 522 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 DEFB108BQ8NET1 73 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 OR51H1Q8NH63 302 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 ASB10Q8WXI3 467 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 CYYR1Q96J86 154 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 MAP6Q96JE9 813 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 PPA2Q9H2U2 334 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 CLDN16Q9Y5I7 305 aa13.12□□□□□ -0.31
TNFRSF11A-206ENST00000617039 XRCC2O43543 280 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 CBR3O75828 277 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 HAAOP46952 286 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 MMP15P51511 669 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 MALLQ13021 153 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 GSG1LQ6UXU4 331 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 FAM122BQ7Z309 247 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 KMT5CQ86Y97 462 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 TTC9Q92623 222 aa13.11□□□□□ -0.31
TNFRSF11A-206ENST00000617039 REEP6Q96HR9 211 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms