RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 TESK1Q15569 626 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 ZNF66Q6ZN08 573 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 PRSS35Q8N3Z0 413 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 RCBTB1Q8NDN9 531 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 PRRX2Q99811 253 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 CHST5Q9GZS9 411 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 C8orf33Q9H7E9 229 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 NXT1Q9UKK6 140 aaKnown RBP12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 C5orf42Q9H799 3197 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 RALGAPA2Q2PPJ7 1873 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 MEGF11A6BM72 1044 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 A6NIZ1 184 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 NPIPA5E9PKD4 350 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 FAM157CP0CG43 387 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 EPHA1P21709 976 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 RAP1BP61224 184 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HERV-K104P61576 105 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 MST1LQ2TV78 715 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 UNQ9370/PRO34162Q6UXP9 181 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 C1orf87Q8N0U7 546 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 ZNF283Q8N7M2 679 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 EXD3Q8N9H8 876 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 WDR92Q96MX6 357 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 ADOQ96SZ5 270 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 URM1Q9BTM9 101 aaKnown RBP12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 DDA1Q9BW61 102 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 NPIPA1Q9UND3 350 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 COA3Q9Y2R0 106 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 RLFQ13129 1914 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 UNC80Q8N2C7 3258 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 UPK3AO75631 287 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 IL12BP29460 328 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 BLVRBP30043 206 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 ZNF93P35789 620 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 NHLH2Q02577 135 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 ANKRD55Q3KP44 614 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 FAM78AQ5JUQ0 283 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 C1QL3Q5VWW1 255 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 DCXRQ7Z4W1 244 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 ERGIC1Q969X5 290 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 DGAT2Q96PD7 388 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 DEFB118Q96PH6 123 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 CABIN1Q9Y6J0 2220 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 PARP14Q460N5 1801 aa12.54□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HMGB3O15347 200 aaKnown RBP12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HIST1H2BKO60814 126 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HIST1H2BJP06899 126 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HIST1H2BOP23527 126 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HIST1H2BBP33778 126 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HIST1H2BDP58876 126 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HIST1H2BCP62807 126 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 OR5I1Q13606 314 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HIST2H2BEQ16778 126 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 TPGS2Q68CL5 300 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 SLC35G3Q8N808 338 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 CYB561D1Q8N8Q1 229 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 KREMEN2Q8NCW0 462 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HIST1H2BHQ93079 126 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HIST1H2BNQ99877 126 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HIST1H2BMQ99879 126 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 TIMM8BQ9Y5J9 83 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 WSB1Q9Y6I7 421 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 EREGO14944 169 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HLA-HP01893 362 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 CXCL1P09341 107 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 SELPP16109 830 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 LAG3P18627 525 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 IL2RGP31785 369 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 KIR3DL2P43630 455 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 LSM6P62312 80 aaKnown RBP12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 TOMM20Q15388 145 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 RTL6Q6ICC9 239 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 Q8WTZ3 238 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 TMEM59Q9BXS4 323 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 PATZ1Q9HBE1 687 aaKnown RBP12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 UBQLN4Q9NRR5 601 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 RNF186Q9NXI6 227 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 KLF15Q9UIH9 416 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 UBE2J1Q9Y385 318 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 LOC285556D6RIA3 1793 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 HELZP42694 1942 aaKnown RBP12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 IGKV1-8A0A0C4DH67 115 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 TRAPPC6AO75865 159 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 DFFBO76075 338 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 ONECUT2O95948 504 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 ACRP10323 421 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 SULT1A2P50226 295 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 SEC13P55735 322 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 ZNF542PQ5EBM4 170 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 OR9A4Q8NGU2 314 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 ADAMTS18Q8TE60 1221 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 MSL2Q9HCI7 577 aa12.53□□□□□ -0.4
TNFRSF11A-205ENST00000616710 TRAV34A0A0B4J273 112 aa12.52□□□□□ -0.4
TNFRSF11A-205ENST00000616710 A0A1B0GTI1 187 aa12.52□□□□□ -0.4
TNFRSF11A-205ENST00000616710 A0A1W2PP55 124 aa12.52□□□□□ -0.4
TNFRSF11A-205ENST00000616710 FAM230AA0A1W2PPH8 454 aa12.52□□□□□ -0.4
TNFRSF11A-205ENST00000616710 SOCS1O15524 211 aa12.52□□□□□ -0.4
TNFRSF11A-205ENST00000616710 ERVS71-1P61550 626 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms