RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 C12orf45Q8N5I9 185 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 NTNG2Q96CW9 530 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 DPAGT1Q9H3H5 408 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 LOC400499M0QZD8 3231 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 CNOT1A5YKK6 2376 aaKnown RBP13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 SMAD9O15198 467 aaKnown RBP13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 SYT7O43581 403 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 TLX3O43711 291 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 KRT33AO76009 404 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 SPP1P10451 314 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 ACHEP22303 614 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 SRD5A2P31213 254 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 TGIF1Q15583 401 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 OR2B11Q5JQS5 317 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 ARMC10Q8N2F6 343 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 BEST4Q8NFU0 473 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 ADAT3Q96EY9 351 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 SPACA5Q96QH8 159 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 FLVCR2Q9UPI3 526 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 DMXL1Q9Y485 3027 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 TMEM272A0A1B0GTI8 110 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 TCRBP04435 133 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 DCTDP32321 178 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 NTF4P34130 210 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 ZNF121P58317 390 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 CSNK2A1P68400 391 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 HIST3H3Q16695 136 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 H3F3CQ6NXT2 135 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 BAIAP2L2Q6UXY1 529 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 RNF144BQ7Z419 303 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 ZIC4Q8N9L1 334 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 FBXO17Q96EF6 278 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 ZNF845Q96IR2 970 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 NAA11Q9BSU3 229 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 MED28Q9H204 178 aa13.74□□□□□ -0.21
SEMA3B-212ENST00000616701 OTOGLQ3ZCN5 2332 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 TRAV18A0A075B6X5 111 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 OR5H15A6NDH6 313 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 SLC17A2O00624 439 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 LPLP06858 475 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 CELA3AP09093 270 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 FKBP2P26885 142 aaKnown RBP13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 MMP16P51512 607 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 SRYQ05066 204 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 TMEM244Q5VVB8 128 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 FCAMRQ8WWV6 532 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 RAB40AQ8WXH6 277 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 NKD1Q969G9 470 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 FAM71F1Q96KD3 344 aaPredicted RBP13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 ATG5Q9H1Y0 275 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 ZMAT3Q9HA38 289 aaKnown RBP13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 SLC5A6Q9Y289 635 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 ETV7Q9Y603 341 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 ZNF878C9JN71 531 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 GSTZ1O43708 216 aaPredicted RBP13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 CTAG2O75638 210 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 PRF1P14222 555 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 IGFBP3P17936 291 aaPredicted RBP13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 CARD18P57730 90 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 GLT8D1Q68CQ7 371 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 DEGS2Q6QHC5 323 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 FAM57BQ71RH2 274 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 GGNQ86UU5 652 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 IL22RA1Q8N6P7 574 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 ZNF283Q8N7M2 679 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 OR1J2Q8NGS2 313 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 CREB3L1Q96BA8 519 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 GHRLQ9UBU3 117 aa13.73□□□□□ -0.21
SEMA3B-212ENST00000616701 FAM166BA8MTA8 275 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 E9PLN8 166 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 GABARAPH6UMI1 98 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 UBCP0CG48 685 aaKnown RBP13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 ABOP16442 354 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 HTR2CP28335 458 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 TRIP6Q15654 476 aaKnown RBP13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 ZNF239Q16600 458 aaKnown RBP13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 LGALSLQ3ZCW2 172 aaPredicted RBP13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 PABPC1L2AQ5JQF8 200 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 ABHD12BQ7Z5M8 362 aaPredicted RBP13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 OR5T2Q8NGG2 359 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 OR8B12Q8NGG6 310 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 OR13C9Q8NGT0 318 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 WBP1Q96G27 269 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 HRASLSQ9HDD0 168 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 PNRC2Q9NPJ4 139 aaKnown RBP13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 ZNF407Q9C0G0 2248 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 F5H5K5 113 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 CTDSPLO15194 276 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 GLSO94925 669 aaPredicted RBP13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 ZNF17P17021 662 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 CX3CR1P49238 355 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 CLDN15P56746 228 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 ABHD17BQ5VST6 288 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 RHOUQ7L0Q8 258 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 OR1M1Q8NGA1 313 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 OR11H7Q8NGC8 314 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 OR52N4Q8NGI2 321 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 OR4D6Q8NGJ1 314 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 OR10D3Q8NH80 312 aa13.72□□□□□ -0.21
SEMA3B-212ENST00000616701 CDC6Q99741 560 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms