RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 RIDAP52758 137 aaKnown RBP14.08□□□□□ -0.16
CBWD3-211ENST00000615061 SNRPGP62308 76 aaKnown RBP14.08□□□□□ -0.16
CBWD3-211ENST00000615061 GABPB1Q06547 395 aaPredicted RBP14.08□□□□□ -0.16
CBWD3-211ENST00000615061 ZMYND11Q15326 602 aa14.08□□□□□ -0.16
CBWD3-211ENST00000615061 FAM201AQ5SY85 155 aa14.08□□□□□ -0.16
CBWD3-211ENST00000615061 GAL3ST1Q99999 423 aa14.08□□□□□ -0.16
CBWD3-211ENST00000615061 ZNF670-ZNF695F2Z2N8 137 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 ZNF254O75437 659 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 SRSF10O75494 262 aaKnown RBP14.07□□□□□ -0.16
CBWD3-211ENST00000615061 IGHV2-5P01817 119 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 GABRB1P18505 474 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 OR8B8Q15620 311 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 IL17RELQ6ZVW7 336 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 PEG10Q86TG7 708 aaKnown RBP14.07□□□□□ -0.16
CBWD3-211ENST00000615061 ENTHD1Q8IYW4 607 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 OR10H4Q8NGA5 316 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 RFKQ969G6 155 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 MNTQ99583 582 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 PBOV1Q9GZY1 135 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 SLC22A4Q9H015 551 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 FAM118AQ9NWS6 357 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 KCNS2Q9ULS6 477 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 RHBDD3Q9Y3P4 386 aa14.07□□□□□ -0.16
CBWD3-211ENST00000615061 LOC100130705A0A1B0GUX0 176 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 ERICH4A6NGS2 130 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 GMDSO60547 372 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 PEX2P28328 305 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 ATP6V1E1P36543 226 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 DDOSTP39656 456 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 GATA4P43694 442 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 BTG1P62324 171 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 POU4F2Q12837 409 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 SLC25A30Q5SVS4 291 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 RGCCQ9H4X1 137 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 GTF2A1LQ9UNN4 478 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 ANKRD30BLA7E2S9 258 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 B4DSR2 109 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 PHYHO14832 338 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 RPP14O95059 124 aaKnown RBP14.06□□□□□ -0.16
CBWD3-211ENST00000615061 OR2T7P0C7T2 308 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 CFL1P23528 166 aaKnown RBP14.06□□□□□ -0.16
CBWD3-211ENST00000615061 DCTDP32321 178 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 MTNR1AP48039 350 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 OCLNQ16625 522 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 WDR86Q86TI4 376 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 CELF2-AS1Q8N7Q2 184 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 C19orf18Q8NEA5 215 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 OR2T27Q8NH04 317 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 OR51E1Q8TCB6 317 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 RNFT2Q96EX2 444 aa14.06□□□□□ -0.16
CBWD3-211ENST00000615061 PAPOLGQ9BWT3 736 aaKnown RBP14.06□□□□□ -0.16
CBWD3-211ENST00000615061 SMPD3Q9NY59 655 aaPredicted RBP14.06□□□□□ -0.16
CBWD3-211ENST00000615061 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.06□□□□□ -0.16
CBWD3-211ENST00000615061 FAM20BO75063 409 aa14.05□□□□□ -0.16
CBWD3-211ENST00000615061 EGR3Q06889 387 aa14.05□□□□□ -0.16
CBWD3-211ENST00000615061 TMED1Q13445 227 aa14.05□□□□□ -0.16
CBWD3-211ENST00000615061 ZNF829Q3KNS6 432 aaPredicted RBP14.05□□□□□ -0.16
CBWD3-211ENST00000615061 ZNF826PQ6ZT77 177 aa14.05□□□□□ -0.16
CBWD3-211ENST00000615061 AMBNQ9NP70 447 aa14.05□□□□□ -0.16
CBWD3-211ENST00000615061 G6PC2Q9NQR9 355 aa14.05□□□□□ -0.16
CBWD3-211ENST00000615061 GPR84Q9NQS5 396 aa14.05□□□□□ -0.16
CBWD3-211ENST00000615061 NUFIP1Q9UHK0 495 aaKnown RBP14.05□□□□□ -0.16
CBWD3-211ENST00000615061 COL6A5A8TX70 2615 aa14.05□□□□□ -0.16
CBWD3-211ENST00000615061 LOC110117498-PIK3R3F6TDL0 507 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 PTBP3O95758 552 aaKnown RBP14.04□□□□□ -0.16
CBWD3-211ENST00000615061 CLIC3O95833 236 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 TTRP02766 147 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 GRPP07492 148 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 MSMBP08118 114 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 SEC61A1P61619 476 aaKnown RBP14.04□□□□□ -0.16
CBWD3-211ENST00000615061 ZNF85Q03923 595 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 CR1LQ2VPA4 569 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 DMRTC1Q5HYR2 192 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 FAM120AOSQ5T036 256 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 ZNF684Q5T5D7 378 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 MEDAGQ5VYS4 303 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 LRRC28Q86X40 367 aaPredicted RBP14.04□□□□□ -0.16
CBWD3-211ENST00000615061 COMMD2Q86X83 199 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 PRIMA1Q86XR5 153 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 YIPF7Q8N8F6 280 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 OR8S1Q8NH09 359 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 RHOXF1Q8NHV9 184 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 RAB39BQ96DA2 213 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 FAM71F1Q96KD3 344 aaPredicted RBP14.04□□□□□ -0.16
CBWD3-211ENST00000615061 HIF1ANQ9NWT6 349 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 NOP16Q9Y3C1 178 aaKnown RBP14.04□□□□□ -0.16
CBWD3-211ENST00000615061 R4GMQ9 66 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 A0A0U1RQV5 110 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 ZNF850A8MQ14 1090 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 J3QRE1 110 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 SLC16A6O15403 523 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 IGLV3-1P01715 115 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 KRT8P05787 483 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 ZNF181Q2M3W8 571 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 CHRFAM7AQ494W8 412 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 LIPNQ5VXI9 398 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 CSNK2A3Q8NEV1 391 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 Q8TCH9 128 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 APH1BQ8WW43 257 aa14.04□□□□□ -0.16
CBWD3-211ENST00000615061 TMEM186Q96B77 213 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms