RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 LPAR6P43657 344 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 SGCAQ16586 387 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 WDR38Q5JTN6 314 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 RNF128Q8TEB7 428 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 MMABQ96EY8 250 aaPredicted RBP19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 DAPP1Q9UN19 280 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 HIF3AQ9Y2N7 669 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 FITM1A5D6W6 292 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 FAM171A2A8MVW0 826 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 FOXS1O43638 330 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 NQO2P16083 231 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 SPINK2P20155 84 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 VAMP1P23763 118 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 CD80P33681 288 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 CENPAP49450 140 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 FOXC1Q12948 553 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 IL11RAQ14626 422 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 TMEM225Q6GV28 225 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 ASB17Q8WXJ9 295 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 LMF1Q96S06 567 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 SLC5A7Q9GZV3 580 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 SPTBN4Q9H254 2564 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 C7orf77A4D0Y5 90 aa19.49■□□□□ 0.71
POLR2J3-220ENST00000613744 H0YIZ8 118 aa19.49■□□□□ 0.71
POLR2J3-220ENST00000613744 LIPCP11150 499 aa19.49■□□□□ 0.71
POLR2J3-220ENST00000613744 FGF5P12034 268 aa19.49■□□□□ 0.71
POLR2J3-220ENST00000613744 ADH6P28332 368 aa19.49■□□□□ 0.71
POLR2J3-220ENST00000613744 RAB1AP62820 205 aa19.49■□□□□ 0.71
POLR2J3-220ENST00000613744 RHEBQ15382 184 aa19.49■□□□□ 0.71
POLR2J3-220ENST00000613744 TMPRSS7Q7RTY8 843 aa19.49■□□□□ 0.71
POLR2J3-220ENST00000613744 OR4N5Q8IXE1 308 aa19.49■□□□□ 0.71
POLR2J3-220ENST00000613744 LRRC75AQ8NAA5 344 aa19.49■□□□□ 0.71
POLR2J3-220ENST00000613744 CASTOR1Q8WTX7 329 aa19.49■□□□□ 0.71
POLR2J3-220ENST00000613744 TMEM184BQ9Y519 407 aaPredicted RBP19.49■□□□□ 0.71
POLR2J3-220ENST00000613744 C13orf42A0A1B0GVH6 325 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 B4E171 279 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 IGFBP3P17936 291 aaPredicted RBP19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 TSPAN7P41732 249 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 OR1D4P47884 311 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 FIP1L1Q6UN15 594 aaKnown RBP19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 NUBPLQ8TB37 319 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 NUDT9Q9BW91 350 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 A6NLC8 198 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 TNFSF15O95150 251 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 CSTBP04080 98 aaKnown RBP19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 HOXB5P09067 269 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 FBXO45P0C2W1 286 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 HOXA5P20719 270 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 CD81P60033 236 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 ZNF141Q15928 474 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 AWAT1Q58HT5 328 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 DCAF12Q5T6F0 453 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 HIST2H3AQ71DI3 136 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 ZAR1Q86SH2 424 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 CD163Q86VB7 1156 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 CA13Q8N1Q1 262 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 OR6N2Q8NGY6 317 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 AKR1E2Q96JD6 320 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 ULBP3Q9BZM4 244 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 LYRM4Q9HD34 91 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 DHDHQ9UQ10 334 aa19.48■□□□□ 0.71
POLR2J3-220ENST00000613744 SCGNO76038 276 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 HKR1P10072 659 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 SLC2A1P11166 492 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 GABREP78334 506 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 FAM53BQ14153 422 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 PRICKLE4Q2TBC4 344 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 ZNF260Q3ZCT1 412 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 C1orf100Q5SVJ3 147 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 ZNF614Q8N883 585 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 OR8B4Q96RC9 309 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 INTS14Q96SY0 518 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 RGCCQ9H4X1 137 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 AKIRIN1Q9H9L7 192 aaPredicted RBP19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 TAF9BQ9HBM6 251 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 PPP4R1LQ9P1A2 415 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 C9orf172C9J069 976 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 PLGP00747 810 aaPredicted RBP19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 GSK3AP49840 483 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 GLYATL3Q5SZD4 288 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 ASPHD2Q6ICH7 369 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 FJX1Q86VR8 437 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 ZNF775Q96BV0 537 aaPredicted RBP19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 FOXJ2Q9P0K8 574 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 STARD10Q9Y365 291 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 SPACA6W5XKT8 324 aa19.47■□□□□ 0.71
POLR2J3-220ENST00000613744 SCN2AQ99250 2005 aa19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 LOC390937A0A1W2PQ73 354 aa19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 C9JQL5 133 aa19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 GAPDHP04406 335 aaKnown RBP19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 NME2P22392 152 aa19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 P2RY4P51582 365 aa19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 EIF3IQ13347 325 aaKnown RBP19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 SLC17A1Q14916 467 aa19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 KLHL26Q53HC5 615 aa19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 TMEM128Q5BJH2 165 aa19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 KRBOX4Q5JUW0 171 aa19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 HOGA1Q86XE5 327 aa19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 OR4S1Q8NGB4 309 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms