RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 GPR32P1Q8NGA4 272 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 ARRDC3Q96B67 414 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 TCTN2Q96GX1 697 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 ASB16Q96NS5 453 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 GGACTQ9BVM4 153 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.98□□□□□ -1.13
TTC28-208ENST00000612946 YIPF1Q9Y548 306 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 FAM72CH0Y354 149 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 ZNF385BQ569K4 471 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 FAM72AQ5TYM5 149 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 ZNF385CQ66K41 422 aaPredicted RBP7.98□□□□□ -1.13
TTC28-208ENST00000612946 FAM72DQ6L9T8 149 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 LCN15Q6UWW0 184 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 CXCL17Q6UXB2 119 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 LRRTM3Q86VH5 581 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 FAM72BQ86X60 149 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 TMEM251Q8N6I4 163 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 WIPI2Q9Y4P8 454 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 ASB1Q9Y576 335 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 KLK8O60259 260 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 RAET1LQ5VY80 246 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 LYRM4Q9HD34 91 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 TRAPPC2LQ9UL33 140 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 R4GMQ9 66 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 LEFTY1O75610 366 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 CBR3O75828 277 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 C1orf105O95561 183 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 BTLAQ7Z6A9 289 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 RNF208Q9H0X6 261 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 GNG12Q9UBI6 72 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 PRSS50Q9UI38 385 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 SLC19A1P41440 591 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 COL9A3Q14050 684 aaPredicted RBP7.97□□□□□ -1.13
TTC28-208ENST00000612946 FAM26DQ5JW98 314 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 ZFYVE21Q9BQ24 234 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 HRASLS2Q9NWW9 162 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 A0A1W2PPE2 198 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 SLC10A3P09131 477 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 ZXDBP98169 803 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 PLPP7Q8NBV4 271 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 RTN4IP1Q8WWV3 396 aaPredicted RBP7.97□□□□□ -1.13
TTC28-208ENST00000612946 MRPL38Q96DV4 380 aaKnown RBP7.97□□□□□ -1.13
TTC28-208ENST00000612946 HIST1H1BP16401 226 aaKnown RBP7.97□□□□□ -1.13
TTC28-208ENST00000612946 NOGQ13253 232 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 ARL14EPQ8N8R7 260 aaPredicted RBP7.97□□□□□ -1.13
TTC28-208ENST00000612946 LRRC15Q8TF66 581 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 CA5BP1Q8WTZ4 195 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 OR2A5Q96R48 311 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 RBM24Q9BX46 236 aaKnown RBP7.97□□□□□ -1.13
TTC28-208ENST00000612946 PSENENQ9NZ42 101 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 PIGLQ9Y2B2 252 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 TMED7Q9Y3B3 224 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 ZNF236Q9UL36 1845 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 TRDCB7Z8K6 153 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 MYOGP15173 224 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 ZNF250P15622 560 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 GUCA2BQ16661 112 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 OR5A2Q8NGI9 324 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 SPANXDQ9BXN6 97 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 FKRPQ9H9S5 495 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 PPT2Q9UMR5 302 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 FER1L5A0AVI2 2057 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 PNLIPRP2P54317 469 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 RTL10Q7L3V2 364 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 CALHM3Q86XJ0 350 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 EDARADDQ8WWZ3 215 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 MAGT1Q9H0U3 335 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 OPN3Q9H1Y3 402 aaPredicted RBP7.97□□□□□ -1.13
TTC28-208ENST00000612946 MCTS1Q9ULC4 181 aaKnown RBP7.97□□□□□ -1.13
TTC28-208ENST00000612946 PLSCR5A0PG75 271 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 FXYD1O00168 92 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 ZNF17P17021 662 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 TGFBR1P36897 503 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 HLA-DRB5Q30154 266 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 TMEM268Q5VZI3 342 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 OR8G5Q8NG78 346 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 GAS2L1Q99501 681 aaPredicted RBP7.97□□□□□ -1.13
TTC28-208ENST00000612946 PDCD1LG2Q9BQ51 273 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 GINS3Q9BRX5 216 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 IL21Q9HBE4 155 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 V9GYH0 126 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 PDCD11Q14690 1871 aaKnown RBP7.97□□□□□ -1.13
TTC28-208ENST00000612946 GYPBP06028 91 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 HLA-GP17693 338 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 GCH1P30793 250 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 FAM3AP98173 230 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 OR7A5Q15622 319 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 SIPA1L1O43166 1804 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 SLC25A6P12236 298 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 FOXK1P85037 733 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 JMJD6Q6NYC1 403 aaPredicted RBP7.97□□□□□ -1.13
TTC28-208ENST00000612946 SPATA6Q9NWH7 488 aaPredicted RBP7.97□□□□□ -1.13
TTC28-208ENST00000612946 FBXL12Q9NXK8 326 aa7.97□□□□□ -1.13
TTC28-208ENST00000612946 SERINC4A6NH21 518 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 TUSC2O75896 110 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 CXCL14O95715 111 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 GPANK1O95872 356 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 HES1Q14469 280 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 OR1L3Q8NH93 324 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 ZCCHC14Q8WYQ9 949 aaKnown RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms