RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 IFT22Q9H7X7 185 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 A0A0D9SG52 128 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 TMEM14DPA8MWL7 114 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 SHISA8B8ZZ34 492 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 TRAF3IP2O43734 574 aaPredicted RBP12.98□□□□□ -0.33
CDH1-213ENST00000612417 IGHG1P01857 330 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 HLA-AP01891 365 aaKnown RBP12.98□□□□□ -0.33
CDH1-213ENST00000612417 SLC25A4P12235 298 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 MGMTP16455 207 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 CD34P28906 385 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 ZNF239Q16600 458 aaKnown RBP12.98□□□□□ -0.33
CDH1-213ENST00000612417 CDNFQ49AH0 187 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 SCGB2B2Q4G0G5 96 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 PRAMEF20Q5VT98 475 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 EIF4E3Q8N5X7 224 aaKnown RBP12.98□□□□□ -0.33
CDH1-213ENST00000612417 MRGPRFQ96AM1 343 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 PTGES2Q9H7Z7 377 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 PFDN2Q9UHV9 154 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 CNTRLQ7Z7A1 2325 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 CNOT1A5YKK6 2376 aaKnown RBP12.98□□□□□ -0.33
CDH1-213ENST00000612417 RIF1Q5UIP0 2472 aaKnown RBP12.98□□□□□ -0.33
CDH1-213ENST00000612417 OR5H14A6NHG9 310 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 KRBOX1C9JBD0 128 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 NDUFA2O43678 99 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 DKK1O94907 266 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 FTH1P19P0C7X4 201 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 UBBP0CG47 229 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 CLRN1P58418 232 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 RPS27AP62979 156 aaKnown RBP12.98□□□□□ -0.33
CDH1-213ENST00000612417 UBA52P62987 128 aaKnown RBP12.98□□□□□ -0.33
CDH1-213ENST00000612417 CXADRP78310 365 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 HYAL4Q2M3T9 481 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 LIN54Q6MZP7 749 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 OR2W3Q7Z3T1 314 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 LYG2Q86SG7 212 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 ZNF546Q86UE3 836 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 OR1S1Q8NH92 325 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 NKD1Q969G9 470 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 PRRX2Q99811 253 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 GPR87Q9BY21 358 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 P4HTMQ9NXG6 502 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 PLEKHA6Q9Y2H5 1048 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 FREM2Q5SZK8 3169 aa12.98□□□□□ -0.33
CDH1-213ENST00000612417 HPP00738 406 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 FGF2P09038 288 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 EIF1AXP47813 144 aaKnown RBP12.97□□□□□ -0.33
CDH1-213ENST00000612417 MLF1P58340 268 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 INPP5JQ15735 1006 aaPredicted RBP12.97□□□□□ -0.33
CDH1-213ENST00000612417 KCNMB1Q16558 191 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 SLC25A47Q6Q0C1 308 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 HSD17B13Q7Z5P4 300 aaPredicted RBP12.97□□□□□ -0.33
CDH1-213ENST00000612417 PDZD9Q8IXQ8 264 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 OR6X1Q8NH79 312 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 LHFPL5Q8TAF8 219 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 MITD1Q8WV92 249 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 ZBTB8AQ96BR9 441 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 CMBLQ96DG6 245 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 LINC00052Q96N35 136 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 LRFN3Q9BTN0 628 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 PPA2Q9H2U2 334 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 NOP16Q9Y3C1 178 aaKnown RBP12.97□□□□□ -0.33
CDH1-213ENST00000612417 CHCHD2Q9Y6H1 151 aaPredicted RBP12.97□□□□□ -0.33
CDH1-213ENST00000612417 DOCK10Q96BY6 2186 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 C21orf140B9A014 251 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 OR2F2O95006 317 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 ZNF93P35789 620 aaPredicted RBP12.97□□□□□ -0.33
CDH1-213ENST00000612417 NUP62P37198 522 aaPredicted RBP12.97□□□□□ -0.33
CDH1-213ENST00000612417 S100A12P80511 92 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 OR2F1Q13607 317 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 HIST3H3Q16695 136 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 NKPD1Q17RQ9 610 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 C17orf107Q6ZR85 190 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 CD163Q86VB7 1156 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 KCNRGQ8N5I3 272 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 OR2M3Q8NG83 312 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 OR4K17Q8NGC6 315 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 OR13C9Q8NGT0 318 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 OR10R2Q8NGX6 335 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 SLC25A43Q8WUT9 341 aaPredicted RBP12.97□□□□□ -0.33
CDH1-213ENST00000612417 SLC25A32Q9H2D1 315 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 HPF1Q9NWY4 346 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 ZNF230Q9UIE0 474 aaPredicted RBP12.97□□□□□ -0.33
CDH1-213ENST00000612417 ANAPC10Q9UM13 185 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 TNFSF18Q9UNG2 199 aa12.97□□□□□ -0.33
CDH1-213ENST00000612417 ZFHX2Q9C0A1 2572 aaPredicted RBP12.96□□□□□ -0.33
CDH1-213ENST00000612417 LOC102725191A0A1B0GVB3 256 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 STMND1H3BQB6 276 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 RLN2P04090 185 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 CHRM2P08172 466 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 ZNF20P17024 532 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 BTF3P20290 206 aaKnown RBP12.96□□□□□ -0.33
CDH1-213ENST00000612417 CCL1P22362 96 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 FKBP2P26885 142 aaKnown RBP12.96□□□□□ -0.33
CDH1-213ENST00000612417 CASRP41180 1078 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 FOXK1P85037 733 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 Q0VFX4 171 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 AWAT2Q6E213 333 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 C11orf87Q6NUJ2 197 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 ZNF600Q6ZNG1 722 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 GVQW1Q8N7I0 195 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms