RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TMEM249Q2WGJ8 235 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 SLC36A2Q495M3 483 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 TSPO2Q5TGU0 170 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 C22orf42Q6IC83 251 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 PEX26Q7Z412 305 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 C10orf67Q8IYJ2 551 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 ARHGAP18Q8N392 663 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 C2orf73Q8N5S3 287 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 OR8K1Q8NGG5 319 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 OR2Y1Q8NGV0 311 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 OR2V1Q8NHB1 315 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 PLPPR1Q8TBJ4 325 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 PIH1D2Q8WWB5 315 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 JSRP1Q96MG2 331 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 NAPGQ99747 312 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 GABARAPL3Q9BY60 117 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 ULBP2Q9BZM5 246 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 C6orf62Q9GZU0 229 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 SYT4Q9H2B2 425 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 C19orf12Q9NSK7 152 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 RMND1Q9NWS8 449 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 MYEF2Q9P2K5 600 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 PRO0461Q9UI25 63 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 C3orf18Q9UK00 162 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 RAB26Q9ULW5 256 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 ERGIC3Q9Y282 383 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 HYOU1Q9Y4L1 999 aa2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 F11RQ9Y624 299 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-213ENST00000609587 MAPK8IP3Q9UPT6 1336 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 A0A1W2PRD5 423 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 GOLGA6L10A6NI86 522 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 C11orf94C9JXX5 98 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 EIF3GO75821 320 aaKnown RBP eCLIP2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 IGLV2-23P01705 113 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 FGGP02679 453 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 SERPINA5P05154 406 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 TACSTD2P09758 323 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 ZNF30P17039 623 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 IVDP26440 423 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 G0S2P27469 103 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 DCKP27707 260 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 HMOX2P30519 316 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 PRLHRP49683 370 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 PPOXP50336 477 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 NKX2-5P52952 324 aaPredicted RBP2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 PSMD4P55036 377 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 MLF1P58340 268 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 SPCS3P61009 180 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 RAB4BP61018 213 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 RPS21P63220 83 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 MRPS22P82650 360 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 HMGCS1Q01581 520 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 MGAT3Q09327 533 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 RSPO1Q2MKA7 263 aaPredicted RBP2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 COX19Q49B96 90 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 TIMM23BQ5SRD1 257 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 MBOAT1Q6ZNC8 495 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 LINC00173Q6ZV60 143 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 NIPA1Q7RTP0 329 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 LINC01551Q86U37 167 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 TMEM135Q86UB9 458 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 CYP4Z2PQ8N1L4 340 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 MREGQ8N565 214 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 TRAM1L1Q8N609 369 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 OR4A4PQ8NGN8 299 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 OR6Q1Q8NGQ2 317 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 RORBQ92753 470 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 CDS1Q92903 461 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 TMEM54Q969K7 222 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 RPEQ96AT9 228 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 DNAJC1Q96KC8 554 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 CEP170P1Q96L14 293 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 SLC17A9Q9BYT1 436 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 BCL2L14Q9BZR8 327 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 OR51M1Q9H341 326 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 PLEKHJ1Q9NW61 149 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 USE1Q9NZ43 259 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 IFNKQ9P0W0 207 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 MMACHCQ9Y4U1 282 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 KIAA0232Q92628 1395 aa2.71□□□□□ -1.98
SMCHD1-213ENST00000609587 NFASCO94856 1347 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 ADGRA3Q8IWK6 1321 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 AK9Q5TCS8 1911 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 IGLV11-55A0A075B6I3 123 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 A0A096LNJ9 63 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 A0A0B4J2A0 478 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 CIB4A0PJX0 185 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 C2orf74A8MZ97 194 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 TMEM114B3SHH9 223 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 SGCEO43556 437 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 SC5DO75845 299 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 DEXIO95424 95 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 HLA-HP01893 362 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 KLK1P06870 262 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 ZDHHC11BP0C7U3 371 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 RD3LP0DJH9 198 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 HSPD1P10809 573 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 PSMC3P17980 439 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 PMCHP20382 165 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms