RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 MVB12AQ96EY5 273 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 CPNE2Q96FN4 548 aaPredicted RBP19.82■□□□□ 0.76
SHANK2-220ENST00000608988 OR10C1Q96KK4 312 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 C1orf147Q96MC9 270 aaPredicted RBP19.82■□□□□ 0.76
SHANK2-220ENST00000608988 TAAR9Q96RI9 348 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 NICN1Q9BSH3 213 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 CNTNAP3Q9BZ76 1288 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 OR11A1Q9GZK7 315 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 METTL1Q9UBP6 276 aaKnown RBP19.82■□□□□ 0.76
SHANK2-220ENST00000608988 GHRLQ9UBU3 117 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 B3GALT5Q9Y2C3 310 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 DOCK8Q8NF50 2099 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 CA11O75493 328 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 MPIG6BO95866 241 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 S100A6P06703 90 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 HLA-DOBP13765 273 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 RPS2P15880 293 aaKnown RBP19.82■□□□□ 0.76
SHANK2-220ENST00000608988 AGAP20933 346 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 OR3A2P47893 321 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 SNRPEP62304 92 aaKnown RBP19.82■□□□□ 0.76
SHANK2-220ENST00000608988 PPA1Q15181 289 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 SMAD2Q15796 467 aaKnown RBP19.82■□□□□ 0.76
SHANK2-220ENST00000608988 RTL6Q6ICC9 239 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 OR2I1PQ8NGU4 316 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 OR13G1Q8NGZ3 307 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 C11orf40Q8WZ69 217 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 HIST1H2BAQ96A08 127 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 SEBOXQ9HB31 216 aaPredicted RBP19.82■□□□□ 0.76
SHANK2-220ENST00000608988 CHST11Q9NPF2 352 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 C1orf123Q9NWV4 160 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 PPP4R1LQ9P1A2 415 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 COPS7AQ9UBW8 275 aa19.82■□□□□ 0.76
SHANK2-220ENST00000608988 B4DGG1 531 aa19.81■□□□□ 0.76
SHANK2-220ENST00000608988 FASLGP48023 281 aa19.81■□□□□ 0.76
SHANK2-220ENST00000608988 ZNF84P51523 738 aa19.81■□□□□ 0.76
SHANK2-220ENST00000608988 HSF1Q00613 529 aa19.81■□□□□ 0.76
SHANK2-220ENST00000608988 EIF2S3LQ2VIR3 472 aaKnown RBP19.81■□□□□ 0.76
SHANK2-220ENST00000608988 DHRS11Q6UWP2 260 aa19.81■□□□□ 0.76
SHANK2-220ENST00000608988 OR5AS1Q8N127 324 aa19.81■□□□□ 0.76
SHANK2-220ENST00000608988 ZNF441Q8N8Z8 693 aa19.81■□□□□ 0.76
SHANK2-220ENST00000608988 TSLPQ969D9 159 aa19.81■□□□□ 0.76
SHANK2-220ENST00000608988 C14orf79Q96F83 325 aa19.81■□□□□ 0.76
SHANK2-220ENST00000608988 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.81■□□□□ 0.76
SHANK2-220ENST00000608988 SUSD2Q9UGT4 822 aa19.81■□□□□ 0.76
SHANK2-220ENST00000608988 FABP1P07148 127 aa19.8■□□□□ 0.76
SHANK2-220ENST00000608988 NME2P22392 152 aa19.8■□□□□ 0.76
SHANK2-220ENST00000608988 CTHP32929 405 aa19.8■□□□□ 0.76
SHANK2-220ENST00000608988 CD80P33681 288 aa19.8■□□□□ 0.76
SHANK2-220ENST00000608988 CSNK1EP49674 416 aaKnown RBP19.8■□□□□ 0.76
SHANK2-220ENST00000608988 P2RY4P51582 365 aa19.8■□□□□ 0.76
SHANK2-220ENST00000608988 SUMO3P55854 103 aaPredicted RBP19.8■□□□□ 0.76
SHANK2-220ENST00000608988 AADACL3Q5VUY0 350 aa19.8■□□□□ 0.76
SHANK2-220ENST00000608988 FAM89BQ8N5H3 189 aa19.8■□□□□ 0.76
SHANK2-220ENST00000608988 RPP25Q9BUL9 199 aaKnown RBP19.8■□□□□ 0.76
SHANK2-220ENST00000608988 SOHLH2Q9NX45 425 aa19.8■□□□□ 0.76
SHANK2-220ENST00000608988 ANKUB1A6NFN9 424 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 SOCS1O15524 211 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 SGCEO43556 437 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 WISP1O95388 367 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 APOBEC1P41238 236 aaKnown RBP19.79■□□□□ 0.76
SHANK2-220ENST00000608988 UCP2P55851 309 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 TMPRSS9Q7Z410 1059 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 OR51F2Q8NH61 342 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 GAS2L1Q99501 681 aaPredicted RBP19.79■□□□□ 0.76
SHANK2-220ENST00000608988 MTIF3Q9H2K0 278 aaKnown RBP19.79■□□□□ 0.76
SHANK2-220ENST00000608988 PLEKHA2Q9HB19 425 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 ZNF304Q9HCX3 659 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 CUTCQ9NTM9 273 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 TUBD1Q9UJT1 453 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 C14orf166Q9Y224 244 aaKnown RBP19.79■□□□□ 0.76
SHANK2-220ENST00000608988 STARD10Q9Y365 291 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 MKI67P46013 3256 aaKnown RBP19.79■□□□□ 0.76
SHANK2-220ENST00000608988 TLCD2A6NGC4 264 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 CCL1P22362 96 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 LAP3P28838 519 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 RPL12P30050 165 aaKnown RBP19.79■□□□□ 0.76
SHANK2-220ENST00000608988 S100A10P60903 97 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 ZNF542PQ5EBM4 170 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 BHLHE23Q8NDY6 225 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 FOXQ1Q9C009 403 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 ARV1Q9H2C2 271 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 ATG2AQ2TAZ0 1938 aa19.79■□□□□ 0.76
SHANK2-220ENST00000608988 A0A1W2PNV4 684 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 ZNF878C9JN71 531 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 K7EPK0 472 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 IFNA2P01563 188 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 IGHV4-34P06331 123 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 MYOGP15173 224 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 ZNF708P17019 499 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 DRD1P21728 446 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 TMEM50BP56557 158 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 ARFRP1Q13795 201 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 Q6ZRG5 221 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 FAM71E2Q8N5Q1 922 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 UBAC2Q8NBM4 344 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 TMEM104Q8NE00 496 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 OR1N1Q8NGS0 311 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 NANPQ8TBE9 248 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 MALSU1Q96EH3 234 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 NRSN2Q9GZP1 204 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms