RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 GFOD2Q3B7J2 385 aa12.28□□□□□ -0.44
CTSA-216ENST00000607212 LYPD4Q6UWN0 246 aa12.28□□□□□ -0.44
CTSA-216ENST00000607212 GCSAMQ8N6F7 178 aa12.28□□□□□ -0.44
CTSA-216ENST00000607212 OR9Q1Q8NGQ5 310 aa12.28□□□□□ -0.44
CTSA-216ENST00000607212 LINC01006Q8NI28 216 aa12.28□□□□□ -0.44
CTSA-216ENST00000607212 H1FXQ92522 213 aaKnown RBP12.28□□□□□ -0.44
CTSA-216ENST00000607212 SLAMF6Q96DU3 332 aa12.28□□□□□ -0.44
CTSA-216ENST00000607212 CCL13Q99616 98 aa12.28□□□□□ -0.44
CTSA-216ENST00000607212 OPA3Q9H6K4 179 aa12.28□□□□□ -0.44
CTSA-216ENST00000607212 SIRT7Q9NRC8 400 aa12.28□□□□□ -0.44
CTSA-216ENST00000607212 TBC1D23Q9NUY8 699 aa12.28□□□□□ -0.44
CTSA-216ENST00000607212 A0A1B0GVI7 797 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 C5orf63A6NC05 138 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 ANKRD61A6NGH8 418 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 SLC22A31A6NKX4 558 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 NDUFB3O43676 98 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 FBP1P09467 338 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 FMO3P31513 532 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 GNALP38405 381 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 ENTPD1P49961 510 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 KRTAP10-3P60369 221 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 PRB3Q04118 309 aaPredicted RBP12.27□□□□□ -0.45
CTSA-216ENST00000607212 TSPAN31Q12999 210 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 PCK2Q16822 640 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 CDONQ4KMG0 1287 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 ASPHD2Q6ICH7 369 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 RPL13AP3Q6NVV1 102 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 SLC36A1Q7Z2H8 476 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 ZDHHC21Q8IVQ6 265 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 OR6K6Q8NGW6 343 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 NSMCE2Q96MF7 247 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 KCNJ15Q99712 375 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 FUZQ9BT04 418 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 SEMA6AQ9H2E6 1030 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 MAGEL2Q9UJ55 1249 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 RPUSD1Q9UJJ7 312 aaKnown RBP12.27□□□□□ -0.45
CTSA-216ENST00000607212 KPTNQ9Y664 436 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 CDH10Q9Y6N8 788 aa12.27□□□□□ -0.45
CTSA-216ENST00000607212 WNK1Q9H4A3 2382 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 NKX6-3A6NJ46 265 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 ZNF878C9JN71 531 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 GYPBP06028 91 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 POU1F1P28069 291 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 NAA10P41227 235 aaPredicted RBP12.26□□□□□ -0.45
CTSA-216ENST00000607212 SLC15A1P46059 708 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 GSSP48637 474 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 CX3CR1P49238 355 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 EIF2B1Q14232 305 aaKnown RBP12.26□□□□□ -0.45
CTSA-216ENST00000607212 OCLNQ16625 522 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 LRRC10Q5BKY1 277 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 WDR38Q5JTN6 314 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 PGBD2Q6P3X8 592 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 KCTD8Q6ZWB6 473 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 RHOUQ7L0Q8 258 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 LDLRAD3Q86YD5 345 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 FGFRL1Q8N441 504 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 FAM216BQ8N7L0 139 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 ZNF511Q8NB15 262 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 SLC37A3Q8NCC5 494 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 OTULINQ96BN8 352 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 REEP6Q96HR9 211 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 PAPOLGQ9BWT3 736 aaKnown RBP12.26□□□□□ -0.45
CTSA-216ENST00000607212 FAM107BQ9H098 131 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 GORASP2Q9H8Y8 452 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 SP140LQ9H930 580 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 BRD7Q9NPI1 651 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 DNAJC27Q9NZQ0 273 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 COMMD3-BMI1R4GMX3 469 aa12.26□□□□□ -0.45
CTSA-216ENST00000607212 TET2Q6N021 2002 aaPredicted RBP12.25□□□□□ -0.45
CTSA-216ENST00000607212 A0A1B0GW55 424 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 ANXA2P2A6NMY6 339 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 ZNF593O00488 134 aaPredicted RBP12.25□□□□□ -0.45
CTSA-216ENST00000607212 CLPXO76031 633 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 PTBP3O95758 552 aaKnown RBP12.25□□□□□ -0.45
CTSA-216ENST00000607212 TSPAN15O95858 294 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 DUX4L2P0CJ85 424 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 DUX4L3P0CJ86 424 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 DUX4L4P0CJ87 422 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 DUX4L5P0CJ88 424 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 DUX4L6P0CJ89 424 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 DUX4L7P0CJ90 424 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 MUC1P15941 1255 aaPredicted RBP12.25□□□□□ -0.45
CTSA-216ENST00000607212 ANOS1P23352 680 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 MSX2P35548 267 aaPredicted RBP12.25□□□□□ -0.45
CTSA-216ENST00000607212 DDOSTP39656 456 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 GRB2P62993 217 aaKnown RBP12.25□□□□□ -0.45
CTSA-216ENST00000607212 CSNK2BP67870 215 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 GUCA2AQ02747 115 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 C2orf68Q2NKX9 166 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 TEX36Q5VZQ5 186 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 DUX4L9Q6RFH8 374 aaPredicted RBP12.25□□□□□ -0.45
CTSA-216ENST00000607212 Q6ZSV7 163 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 FAM57BQ71RH2 274 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 OR1M1Q8NGA1 313 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 OR9Q2Q8NGE9 314 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 MICU1Q9BPX6 476 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 ELAC2Q9BQ52 826 aaKnown RBP12.25□□□□□ -0.45
CTSA-216ENST00000607212 CCDC134Q9H6E4 229 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 DUX4Q9UBX2 424 aa12.25□□□□□ -0.45
CTSA-216ENST00000607212 A0A1W2PQ09 198 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms