RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 POC5Q8NA72 575 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 SPSB4Q96A44 273 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 HAVCR1Q96D42 359 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 FAM122AQ96E09 287 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 ZNF75AQ96N20 296 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 ABHD1Q96SE0 405 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 NKX3-1Q99801 234 aaPredicted RBP18.73■□□□□ 0.59
USP6NL-204ENST00000606752 TP63Q9H3D4 680 aaPredicted RBP18.73■□□□□ 0.59
USP6NL-204ENST00000606752 RHBDL2Q9NX52 303 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 RABL2AQ9UBK7 228 aaPredicted RBP18.73■□□□□ 0.59
USP6NL-204ENST00000606752 RABL2BQ9UNT1 228 aa18.73■□□□□ 0.59
USP6NL-204ENST00000606752 SPENQ96T58 3664 aaKnown RBP18.72■□□□□ 0.59
USP6NL-204ENST00000606752 MAGEB3O15480 346 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 ARSBP15848 533 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 CEACAM8P31997 349 aaPredicted RBP18.72■□□□□ 0.59
USP6NL-204ENST00000606752 MAP2K3P46734 347 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 CAPZA1P52907 286 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 ZNF92Q03936 586 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 SCN1BQ07699 218 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 RIPPLY1Q0D2K3 151 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 OXA1LQ15070 435 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 TRIM16LQ309B1 348 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 C3P1Q6ZMU1 363 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 Q6ZNX1 250 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 BEND4Q6ZU67 534 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 MINDY2Q8NBR6 621 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 NAXEQ8NCW5 288 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 CHST5Q9GZS9 411 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 OPN3Q9H1Y3 402 aaPredicted RBP18.72■□□□□ 0.59
USP6NL-204ENST00000606752 CNTD2Q9H8S5 307 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 ASF1BQ9NVP2 202 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 RHBDD3Q9Y3P4 386 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 A0A1W2PQ09 198 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 ACKR3P25106 362 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 ZNF93P35789 620 aaPredicted RBP18.72■□□□□ 0.59
USP6NL-204ENST00000606752 PITPNAQ00169 270 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 P2RY6Q15077 328 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 DOLPP1Q86YN1 238 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 OR4D6Q8NGJ1 314 aa18.72■□□□□ 0.59
USP6NL-204ENST00000606752 APOBEC3DQ96AK3 386 aaPredicted RBP18.72■□□□□ 0.59
USP6NL-204ENST00000606752 IGKV1-9A0A0C4DH69 117 aa18.71■□□□□ 0.59
USP6NL-204ENST00000606752 FAM3AP98173 230 aa18.71■□□□□ 0.59
USP6NL-204ENST00000606752 SETD6Q8TBK2 473 aa18.71■□□□□ 0.59
USP6NL-204ENST00000606752 MS4A3Q96HJ5 214 aa18.71■□□□□ 0.59
USP6NL-204ENST00000606752 ZNF835Q9Y2P0 537 aa18.71■□□□□ 0.59
USP6NL-204ENST00000606752 MRPS7Q9Y2R9 242 aaKnown RBP18.71■□□□□ 0.59
USP6NL-204ENST00000606752 hCG_38984A0A1B0GV85 526 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 OCMP0CE72 109 aaPredicted RBP18.7■□□□□ 0.58
USP6NL-204ENST00000606752 GLI4P10075 376 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 PRF1P14222 555 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 GSK3AP49840 483 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 PLA2G7Q13093 441 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 TNK1Q13470 666 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 UBE2V2Q15819 145 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 PRR30Q53SZ7 412 aaPredicted RBP18.7■□□□□ 0.58
USP6NL-204ENST00000606752 SFXN3Q9BWM7 321 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 TMEM272A0A1B0GTI8 110 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 HLA-DQB1P01920 261 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 HCKP08631 526 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 HOXC12P31275 282 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 RANBP1P43487 201 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 OR8B8Q15620 311 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 TSC22D1Q15714 1073 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 TRIQKQ629K1 86 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 CXorf67Q86X51 503 aaPredicted RBP18.7■□□□□ 0.58
USP6NL-204ENST00000606752 SLC30A7Q8NEW0 376 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 SSC4DQ8WTU2 575 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 TBC1D24Q9ULP9 559 aa18.7■□□□□ 0.58
USP6NL-204ENST00000606752 INTS1Q8N201 2190 aaKnown RBP18.69■□□□□ 0.58
USP6NL-204ENST00000606752 ZNF14P17017 642 aaPredicted RBP18.69■□□□□ 0.58
USP6NL-204ENST00000606752 C17orf78Q8N4C9 275 aa18.69■□□□□ 0.58
USP6NL-204ENST00000606752 BSNQ9UPA5 3926 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 A0A1W2PR80 420 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 LDLRAD4O15165 306 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 CTDSPLO15194 276 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 TPPPO94811 219 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 CDK2P24941 298 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 MMP15P51511 669 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 EFNB2P52799 333 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 KLRB1Q12918 225 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 MALLQ13021 153 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 TBC1D28Q2M2D7 210 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 IZUMO1Q8IYV9 350 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 WDR31Q8NA23 367 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 C19orf18Q8NEA5 215 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 PTX4Q96A99 478 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 COX4I2Q96KJ9 171 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 SPACA5Q96QH8 159 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 THAP7Q9BT49 309 aaPredicted RBP18.68■□□□□ 0.58
USP6NL-204ENST00000606752 REPIN1Q9BWE0 567 aaKnown RBP18.68■□□□□ 0.58
USP6NL-204ENST00000606752 KCNK15Q9H427 330 aa18.68■□□□□ 0.58
USP6NL-204ENST00000606752 PTTG1O95997 202 aa18.67■□□□□ 0.58
USP6NL-204ENST00000606752 TAB1Q15750 504 aa18.67■□□□□ 0.58
USP6NL-204ENST00000606752 TMEM69Q5SWH9 247 aa18.67■□□□□ 0.58
USP6NL-204ENST00000606752 ANGPTL5Q86XS5 388 aa18.67■□□□□ 0.58
USP6NL-204ENST00000606752 ITFG2Q969R8 447 aa18.67■□□□□ 0.58
USP6NL-204ENST00000606752 TBCCD1Q9NVR7 557 aa18.67■□□□□ 0.58
USP6NL-204ENST00000606752 STARD10Q9Y365 291 aa18.67■□□□□ 0.58
USP6NL-204ENST00000606752 GMDSO60547 372 aa18.67■□□□□ 0.58
USP6NL-204ENST00000606752 CTAG2O75638 210 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms