RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 OR52A1Q9UKL2 312 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 TMEM269A0A1B0GVZ9 245 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 ZNF503-AS2A6NEH8 195 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 PATE4P0C8F1 98 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 COX5BP10606 129 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 ZNF14P17017 642 aaPredicted RBP8.72□□□□□ -1.01
UPF1-213ENST00000601981 SRMP19623 302 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 STOMP27105 288 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 APEX1P27695 318 aaKnown RBP8.72□□□□□ -1.01
UPF1-213ENST00000601981 THBS2P35442 1172 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 RPS23P62266 143 aaKnown RBP8.72□□□□□ -1.01
UPF1-213ENST00000601981 ECH1Q13011 328 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 RAB35Q15286 201 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 CEP78Q5JTW2 689 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 BCL2L15Q5TBC7 163 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 TMEM244Q5VVB8 128 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 HIST2H2BCQ6DN03 193 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 ADAM5Q6NVV9 412 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 ZNF295-AS1Q8N0V1 137 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 PARP16Q8N5Y8 322 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 SLC30A7Q8NEW0 376 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 TSEN15Q8WW01 171 aaKnown RBP8.72□□□□□ -1.01
UPF1-213ENST00000601981 FBXW5Q969U6 566 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 FBXO17Q96EF6 278 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 CCDC32Q9BV29 185 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 ABCB9Q9NP78 766 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 FAM206AQ9NX38 181 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 ABRACLQ9P1F3 81 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 COMMD3Q9UBI1 195 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 EIF3KQ9UBQ5 218 aaKnown RBP8.72□□□□□ -1.01
UPF1-213ENST00000601981 NUFIP1Q9UHK0 495 aaKnown RBP8.72□□□□□ -1.01
UPF1-213ENST00000601981 HHLA2Q9UM44 414 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 GTF2A1LQ9UNN4 478 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 SLC22A13Q9Y226 551 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 ATP23Q9Y6H3 246 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 V9GYH0 126 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 ROS1P08922 2347 aa8.72□□□□□ -1.01
UPF1-213ENST00000601981 RTTNQ86VV8 2226 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 IGHV2OR16-5A0A0B4J2B6 119 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 LOC107986453A0A1B0GWG9 222 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 A0A1W2PPK0 400 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 OR6C6A6NF89 314 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 ATP6V1G2-DDX39BF2Z307 99 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 RER1O15258 196 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 SIAH2O43255 324 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 UPK1BO75841 260 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 CD2P06729 351 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 ZNF12P17014 697 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 FSTP19883 344 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 CCNOP22674 350 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 PTBP1P26599 531 aaKnown RBP eCLIP8.71□□□□□ -1.02
UPF1-213ENST00000601981 HSD11B1P28845 292 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 HTR5AP47898 357 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 SOX2P48431 317 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 OR10A3P58181 314 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 PSG4Q00888 419 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 TAF13Q15543 124 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 ZNF181Q2M3W8 571 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 ELFN2Q5R3F8 820 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 IDNKQ5T6J7 187 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 ZNF774Q6NX45 483 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 METAP1DQ6UB28 335 aaPredicted RBP8.71□□□□□ -1.02
UPF1-213ENST00000601981 C20orf204Q6ZNR8 217 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 C1orf174Q8IYL3 243 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 ELMOD2Q8IZ81 293 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 OR10AC1Q8NH08 325 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 AKR7LQ8NHP1 331 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 FGFBP3Q8TAT2 258 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 TMEM106AQ96A25 262 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 TMEM204Q9BSN7 226 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 MRI1Q9BV20 369 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 PBOV1Q9GZY1 135 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 WNT5BQ9H1J7 359 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 NOX3Q9HBY0 568 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 TCF7L1Q9HCS4 588 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 DAPK2Q9UIK4 370 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 DHDHQ9UQ10 334 aa8.71□□□□□ -1.02
UPF1-213ENST00000601981 RAI1Q7Z5J4 1906 aaPredicted RBP8.7□□□□□ -1.02
UPF1-213ENST00000601981 ISPDA4D126 451 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 C5orf49A4QMS7 147 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 AIPO00170 330 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 HS3ST1O14792 307 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 HPGDSO60760 199 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 APOC1P02654 83 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 CELA3BP08861 270 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 CFPP27918 469 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 RAD52P43351 418 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 MAGEB1P43366 347 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 PSMD7P51665 324 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 ODF4Q2M2E3 257 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 RGS21Q2M5E4 152 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 ZNF672Q499Z4 452 aaPredicted RBP8.7□□□□□ -1.02
UPF1-213ENST00000601981 LRRTM1Q86UE6 522 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 LRRC28Q86X40 367 aaPredicted RBP8.7□□□□□ -1.02
UPF1-213ENST00000601981 RDH10Q8IZV5 341 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 NUP37Q8NFH4 326 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 OR51A4Q8NGJ6 313 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 OR1F12Q8NHA8 337 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 TRMT10AQ8TBZ6 339 aaKnown RBP8.7□□□□□ -1.02
UPF1-213ENST00000601981 AKAP1Q92667 903 aaKnown RBP eCLIP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms