RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 MPPED2Q15777 294 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 TMEM255AQ5JRV8 349 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 C10orf128Q5T292 105 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 TMEM244Q5VVB8 128 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 PLXDC2Q6UX71 529 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 SERPINA12Q8IW75 414 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 TUSC5Q8IXB3 177 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 OR8H1Q8NGG4 311 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 OR51A4Q8NGJ6 313 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 OR2T35Q8NGX2 323 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 FOXN4Q96NZ1 517 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 TRIB1Q96RU8 372 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 ULBP2Q9BZM5 246 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 CALHM2Q9HA72 323 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 MYOZ1Q9NP98 299 aaPredicted RBP10.27□□□□□ -0.77
VRK3-223ENST00000601341 GLRX2Q9NS18 164 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 LRP12Q9Y561 859 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 ATMQ13315 3056 aa10.27□□□□□ -0.77
VRK3-223ENST00000601341 A0A1W2PPL8 197 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 ARPC1BO15143 372 aaKnown RBP10.26□□□□□ -0.77
VRK3-223ENST00000601341 ZNHIT1O43257 154 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 SPARCP09486 303 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 RAB6AP20340 208 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 PRSS3P35030 304 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 OR3A3P47888 321 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 EIF2B1Q14232 305 aaKnown RBP10.26□□□□□ -0.77
VRK3-223ENST00000601341 C2orf76Q3KRA6 126 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 LGALSLQ3ZCW2 172 aaPredicted RBP10.26□□□□□ -0.77
VRK3-223ENST00000601341 C1orf100Q5SVJ3 147 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 RIPPLY2Q5TAB7 128 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 NLRC3Q7RTR2 1065 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 GPR137CQ8N3F9 429 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 OR51D1Q8NGF3 324 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 OR10AC1Q8NH08 325 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 GPX8Q8TED1 209 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 WNT2BQ93097 391 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 SLC25A28Q96A46 364 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 DACT3Q96B18 629 aaPredicted RBP10.26□□□□□ -0.77
VRK3-223ENST00000601341 GMPPAQ96IJ6 420 aaPredicted RBP10.26□□□□□ -0.77
VRK3-223ENST00000601341 OR10A4Q9H209 315 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 METTL17Q9H7H0 456 aaPredicted RBP10.26□□□□□ -0.77
VRK3-223ENST00000601341 SEC61A2Q9H9S3 476 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 CLCF1Q9UBD9 225 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 UPB1Q9UBR1 384 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 UBE2QL1A1L167 161 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 G3V3Q6 166 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 DHHO43323 396 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 DOK2O60496 412 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 SCGNO76038 276 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 MPZL1O95297 269 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 PNPP00491 289 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 ALDOBP05062 364 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 LPLP06858 475 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 PTGER4P35408 488 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 ZNF84P51523 738 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 KLRB1Q12918 225 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 PCGF3Q3KNV8 242 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 CLLU1Q5K131 121 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 PHYHD1Q5SRE7 291 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 RAB12Q6IQ22 244 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 SLC36A1Q7Z2H8 476 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.26□□□□□ -0.77
VRK3-223ENST00000601341 BEST4Q8NFU0 473 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 OR10H5Q8NGA6 315 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 ST7LQ8TDW4 575 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 SLC25A21Q9BQT8 299 aaPredicted RBP10.26□□□□□ -0.77
VRK3-223ENST00000601341 NUDT16L1Q9BRJ7 211 aaKnown RBP10.26□□□□□ -0.77
VRK3-223ENST00000601341 RBM24Q9BX46 236 aaKnown RBP10.26□□□□□ -0.77
VRK3-223ENST00000601341 NKIRAS2Q9NYR9 191 aa10.26□□□□□ -0.77
VRK3-223ENST00000601341 HMSDA8MTL9 139 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 LDLRAD4O15165 306 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 WDR1O75083 606 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 HTR2CP28335 458 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 KCNMB1Q16558 191 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 ACSF3Q4G176 576 aaPredicted RBP10.25□□□□□ -0.77
VRK3-223ENST00000601341 OR2A2Q6IF42 318 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 ZNF585AQ6P3V2 769 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 MTFR2Q6P444 385 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 Q6ZTK2 550 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 TMEM229BQ8NBD8 167 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 RNF133Q8WVZ7 376 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 C11orf40Q8WZ69 217 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 APH1AQ96BI3 265 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 SNRNP40Q96DI7 357 aaKnown RBP10.25□□□□□ -0.77
VRK3-223ENST00000601341 LINC00470Q9BZP3 86 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 CRLF2Q9HC73 371 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 FLVCR2Q9UPI3 526 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 KIAA1549Q9HCM3 1950 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 ZZEF1O43149 2961 aa10.25□□□□□ -0.77
VRK3-223ENST00000601341 DSPP15924 2871 aaKnown RBP10.24□□□□□ -0.77
VRK3-223ENST00000601341 PLSCR5A0PG75 271 aa10.24□□□□□ -0.77
VRK3-223ENST00000601341 FIGNL2A6NMB9 653 aa10.24□□□□□ -0.77
VRK3-223ENST00000601341 SS18L1O75177 396 aaPredicted RBP10.24□□□□□ -0.77
VRK3-223ENST00000601341 WNT11O96014 354 aa10.24□□□□□ -0.77
VRK3-223ENST00000601341 HOXD4P09016 255 aaPredicted RBP10.24□□□□□ -0.77
VRK3-223ENST00000601341 ABOP16442 354 aa10.24□□□□□ -0.77
VRK3-223ENST00000601341 AGTR1P30556 359 aa10.24□□□□□ -0.77
VRK3-223ENST00000601341 CDAP32320 146 aa10.24□□□□□ -0.77
VRK3-223ENST00000601341 RPS27P42677 84 aaKnown RBP10.24□□□□□ -0.77
VRK3-223ENST00000601341 RAD52P43351 418 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms