RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 OR2T33Q8NG76 320 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 C22orf15Q8WYQ4 148 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 DVL3Q92997 716 aaPredicted RBP11.55□□□□□ -0.56
SCAF1-203ENST00000598359 SPTSSAQ969W0 71 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 OTULINQ96BN8 352 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 TSC22D3Q99576 134 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 SLC6A7Q99884 636 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 COPS4Q9BT78 406 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 DUSP21Q9H596 190 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 ZNF556Q9HAH1 456 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 CENPMQ9NSP4 180 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 PLCXD1Q9NUJ7 323 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 TMEM100Q9NV29 134 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 KCNG2Q9UJ96 466 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 CEACAM18A8MTB9 384 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 F5H0A9 414 aaPredicted RBP11.54□□□□□ -0.56
SCAF1-203ENST00000598359 H3BN98 237 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 ZNF593O00488 134 aaPredicted RBP11.54□□□□□ -0.56
SCAF1-203ENST00000598359 CA6P23280 308 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 POU1F1P28069 291 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 EPHA2P29317 976 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 FMO3P31513 532 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 MDH2P40926 338 aaKnown RBP11.54□□□□□ -0.56
SCAF1-203ENST00000598359 SRP9P49458 86 aaKnown RBP11.54□□□□□ -0.56
SCAF1-203ENST00000598359 ENTPD1P49961 510 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 SLC25A1P53007 311 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 SLC35A2P78381 396 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 MAB21L1Q13394 359 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 TMEM155Q4W5P6 130 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 GLYATL3Q5SZD4 288 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 XAF1Q6GPH4 301 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 CD300LDQ6UXZ3 194 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 KCTD8Q6ZWB6 473 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 PGAP1Q75T13 922 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 GPR141Q7Z602 305 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 ENTHD1Q8IYW4 607 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 SPARTQ8N0X7 666 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 CNIH3Q8TBE1 160 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 APH1BQ8WW43 257 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 SPRYD4Q8WW59 207 aaPredicted RBP11.54□□□□□ -0.56
SCAF1-203ENST00000598359 TMIGD2Q96BF3 282 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 SLAMF6Q96DU3 332 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 TMEM165Q9HC07 324 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 VCX3AQ9NNX9 186 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 DDX28Q9NUL7 540 aaKnown RBP11.54□□□□□ -0.56
SCAF1-203ENST00000598359 UFSP2Q9NUQ7 469 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 RSL24D1Q9UHA3 163 aaKnown RBP11.54□□□□□ -0.56
SCAF1-203ENST00000598359 TPRKBQ9Y3C4 175 aa11.54□□□□□ -0.56
SCAF1-203ENST00000598359 A0A1B0GWJ7 208 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 RIIAD1A6NNX1 92 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 ZAR1LA6NP61 321 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 CD300LBA8K4G0 201 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 J3QLI3 93 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 WBP4O75554 376 aaKnown RBP11.53□□□□□ -0.56
SCAF1-203ENST00000598359 FOXH1O75593 365 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 IFNGP01579 166 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 GABRB1P18505 474 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 GSTT1P30711 240 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 TAF13Q15543 124 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 MPPED2Q15777 294 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 LINC01590Q5TEZ4 76 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 DEFB108BQ8NET1 73 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 OR13F1Q8NGS4 319 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 TEX47Q8TBZ9 253 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 CMC2Q9NRP2 79 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 PAK1IP1Q9NWT1 392 aaPredicted RBP11.53□□□□□ -0.56
SCAF1-203ENST00000598359 BAIAP2Q9UQB8 552 aa11.53□□□□□ -0.56
SCAF1-203ENST00000598359 WNK2Q9Y3S1 2297 aa11.52□□□□□ -0.56
SCAF1-203ENST00000598359 GGT3PA6NGU5 568 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 FAM20BO75063 409 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 FSHBP01225 129 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 WNT2P09544 360 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 OSMP13725 252 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 ZNF3P17036 446 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 DCKP27707 260 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 OTX1P32242 354 aaPredicted RBP11.52□□□□□ -0.57
SCAF1-203ENST00000598359 CRISP1P54107 249 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 EIF2B1Q14232 305 aaKnown RBP11.52□□□□□ -0.57
SCAF1-203ENST00000598359 OR8G1Q15617 311 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 PCK2Q16822 640 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 DRAM2Q6UX65 266 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 DPY19L4Q7Z388 723 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 ERI1Q8IV48 349 aaKnown RBP11.52□□□□□ -0.57
SCAF1-203ENST00000598359 OR6N2Q8NGY6 317 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 RHOXF1Q8NHV9 184 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 NANPQ8TBE9 248 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 ZNF418Q8TF45 676 aaPredicted RBP11.52□□□□□ -0.57
SCAF1-203ENST00000598359 MUL1Q969V5 352 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 AMELYQ99218 206 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 TMEM246Q9BRR3 403 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 ADAT1Q9BUB4 502 aaKnown RBP11.52□□□□□ -0.57
SCAF1-203ENST00000598359 FKBP14Q9NWM8 211 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 SCN3BQ9NY72 215 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 TENM1Q9UKZ4 2725 aa11.52□□□□□ -0.57
SCAF1-203ENST00000598359 TBX1O43435 398 aa11.51□□□□□ -0.57
SCAF1-203ENST00000598359 MPZL2O60487 215 aa11.51□□□□□ -0.57
SCAF1-203ENST00000598359 RPS2P15880 293 aaKnown RBP11.51□□□□□ -0.57
SCAF1-203ENST00000598359 ZNF12P17014 697 aa11.51□□□□□ -0.57
SCAF1-203ENST00000598359 GATA3P23771 443 aa11.51□□□□□ -0.57
SCAF1-203ENST00000598359 EEF1B2P24534 225 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms