RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 OR6C68A6NDL8 312 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 OR6C6A6NF89 314 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 F5H5P2 479 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 RER1O15258 196 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 CST1P01037 141 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 PSMB10P40306 273 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 EFNB2P52799 333 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 FLOT2Q14254 428 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 GK3PQ14409 553 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 CCDC92Q53HC0 331 aaPredicted RBP11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 SLC35F1Q5T1Q4 408 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 ARL9Q6T311 187 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 DCDC5Q6ZRR9 648 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 NPEPL1Q8NDH3 523 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 SLC26A10Q8NG04 563 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 DGCR6LQ9BY27 220 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 SRA1Q9HD15 236 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 TBC1D23Q9NUY8 699 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 ATPIF1Q9UII2 106 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 POLR1DQ9Y2S0 133 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 LHFPL6Q9Y693 200 aa11.3□□□□□ -0.6
SHKBP1-208ENST00000595726 A0A1W2PRD5 423 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 A0A1W2PRF3 423 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 A0A1W2PRM7 423 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 DNAJC8O75937 253 aaPredicted RBP11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 SOX14O95416 240 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 LIPFP07098 398 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 IGLL1P15814 213 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 CENPAP49450 140 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 HIST1H3AP68431 136 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 BNIP1Q12981 228 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 ZBTB37Q5TC79 503 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 HIST2H3PS2Q5TEC6 136 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 CD276Q5ZPR3 534 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 OR2T2Q6IF00 324 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 HIST2H3AQ71DI3 136 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 GALNT4Q8N4A0 578 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 KLHDC1Q8N7A1 406 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 OR10G2Q8NGC3 310 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 SLC7A6Q92536 515 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 DDOQ99489 341 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 NIPSNAP1Q9BPW8 284 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 MMADHCQ9H3L0 296 aaPredicted RBP11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 SMURF1Q9HCE7 757 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 TBCCD1Q9NVR7 557 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 ZNRD1Q9P1U0 126 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 POMPQ9Y244 141 aa11.29□□□□□ -0.6
SHKBP1-208ENST00000595726 WI2-2373I1.2A0A1W2PRP0 233 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 BTBD17A6NE02 478 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 ARRDC5A6NEK1 342 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 LRRC30A6NM36 301 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 MLNRO43193 412 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 FCN3O75636 299 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 HOXB6P17509 224 aaKnown RBP11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 SRP9P49458 86 aaKnown RBP11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 DLX1P56177 255 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 CORO6Q6QEF8 472 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 TMEM179BQ7Z7N9 219 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 SPATA24Q86W54 205 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 LNX2Q8N448 690 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 CYB561A3Q8NBI2 242 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 GJC3Q8NFK1 279 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 OR4Q3Q8NH05 313 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 OR1F12Q8NHA8 337 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 PTP4A1Q93096 173 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 R3HDM4Q96D70 268 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 TSSK6Q9BXA6 273 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 CADM1Q9BY67 442 aaKnown RBP11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 HDHD2Q9H0R4 259 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 ARMC1Q9NVT9 282 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 MRPL22Q9NWU5 206 aaKnown RBP11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 DNAJB11Q9UBS4 358 aa11.28□□□□□ -0.6
SHKBP1-208ENST00000595726 TCRBV3S1A0A5B6 114 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 GSC2O15499 205 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 FSTL3O95633 263 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 HLA-DPB1P04440 258 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 DBHP09172 617 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 VSIG10L2P0DP72 767 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 ZNF181Q2M3W8 571 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 SFRP4Q6FHJ7 346 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 SLC18B1Q6NT16 456 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 CD300LDQ6UXZ3 194 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 CFAP77Q6ZQR2 320 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 VMO1Q7Z5L0 202 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 LINC00346Q8IVM7 164 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 C1orf87Q8N0U7 546 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 BOLLQ8N9W6 283 aaKnown RBP11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 PNLDC1Q8NA58 520 aaKnown RBP11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 SLC37A3Q8NCC5 494 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 BHLHE23Q8NDY6 225 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 OR2T33Q8NG76 320 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 OR8G5Q8NG78 346 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 OR4S1Q8NGB4 309 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 OR13G1Q8NGZ3 307 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 GIPC3Q8TF64 312 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 ZNRF4Q8WWF5 429 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 FEVQ99581 238 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 COQ7Q99807 217 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms