RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CLIC3O95833 236 aa21.82■■□□□ 1.08
TRIM28-204ENST00000594806 CD200P41217 278 aa21.82■■□□□ 1.08
TRIM28-204ENST00000594806 OR8G1Q15617 311 aa21.82■■□□□ 1.08
TRIM28-204ENST00000594806 GFOD2Q3B7J2 385 aa21.82■■□□□ 1.08
TRIM28-204ENST00000594806 LIPNQ5VXI9 398 aa21.82■■□□□ 1.08
TRIM28-204ENST00000594806 OR10AD1Q8NGE0 317 aa21.82■■□□□ 1.08
TRIM28-204ENST00000594806 ITLN1Q8WWA0 313 aa21.82■■□□□ 1.08
TRIM28-204ENST00000594806 NRG4Q8WWG1 115 aa21.82■■□□□ 1.08
TRIM28-204ENST00000594806 ERGIC1Q969X5 290 aa21.82■■□□□ 1.08
TRIM28-204ENST00000594806 TIMD4Q96H15 378 aa21.82■■□□□ 1.08
TRIM28-204ENST00000594806 MEGF10Q96KG7 1140 aa21.82■■□□□ 1.08
TRIM28-204ENST00000594806 SIGLEC11Q96RL6 698 aa21.82■■□□□ 1.08
TRIM28-204ENST00000594806 ABCB9Q9NP78 766 aa21.82■■□□□ 1.08
TRIM28-204ENST00000594806 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP21.81■■□□□ 1.08
TRIM28-204ENST00000594806 PPIHO43447 177 aaKnown RBP21.81■■□□□ 1.08
TRIM28-204ENST00000594806 PNPP00491 289 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 CA6P23280 308 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 GATA4P43694 442 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 CHN2P52757 468 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 ACTA2P62736 377 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 ACTG2P63267 376 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 CDONQ4KMG0 1287 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 BCL2L15Q5TBC7 163 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 PEG10Q86TG7 708 aaKnown RBP21.81■■□□□ 1.08
TRIM28-204ENST00000594806 ELMOD2Q8IZ81 293 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 PLPP7Q8NBV4 271 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 CCL17Q92583 94 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 TFAP2CQ92754 450 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 AMBNQ9NP70 447 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 G6PC2Q9NQR9 355 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 OR52A1Q9UKL2 312 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 PPP1R3CQ9UQK1 317 aa21.81■■□□□ 1.08
TRIM28-204ENST00000594806 H0YL77 283 aa21.8■■□□□ 1.08
TRIM28-204ENST00000594806 MAGEB4O15481 346 aaPredicted RBP21.8■■□□□ 1.08
TRIM28-204ENST00000594806 MTRF1O75570 445 aaKnown RBP21.8■■□□□ 1.08
TRIM28-204ENST00000594806 IGLV3-1P01715 115 aa21.8■■□□□ 1.08
TRIM28-204ENST00000594806 IGHA1P01876 353 aa21.8■■□□□ 1.08
TRIM28-204ENST00000594806 HLA-DPB1P04440 258 aa21.8■■□□□ 1.08
TRIM28-204ENST00000594806 MAP2K3P46734 347 aa21.8■■□□□ 1.08
TRIM28-204ENST00000594806 MFGE8Q08431 387 aaPredicted RBP21.8■■□□□ 1.08
TRIM28-204ENST00000594806 KRT74Q7RTS7 529 aa21.8■■□□□ 1.08
TRIM28-204ENST00000594806 HPS1Q92902 700 aa21.8■■□□□ 1.08
TRIM28-204ENST00000594806 RAB1CQ92928 201 aa21.8■■□□□ 1.08
TRIM28-204ENST00000594806 LYZL4Q96KX0 146 aa21.8■■□□□ 1.08
TRIM28-204ENST00000594806 ADAT1Q9BUB4 502 aaKnown RBP21.8■■□□□ 1.08
TRIM28-204ENST00000594806 ABCA1O95477 2261 aa21.8■■□□□ 1.08
TRIM28-204ENST00000594806 F5H5P2 479 aa21.79■■□□□ 1.08
TRIM28-204ENST00000594806 RPP14O95059 124 aaKnown RBP21.79■■□□□ 1.08
TRIM28-204ENST00000594806 TTRP02766 147 aa21.79■■□□□ 1.08
TRIM28-204ENST00000594806 GALEQ14376 348 aa21.79■■□□□ 1.08
TRIM28-204ENST00000594806 ZNF181Q2M3W8 571 aa21.79■■□□□ 1.08
TRIM28-204ENST00000594806 SPRNQ5BIV9 151 aa21.79■■□□□ 1.08
TRIM28-204ENST00000594806 ZBTB37Q5TC79 503 aa21.79■■□□□ 1.08
TRIM28-204ENST00000594806 CNIH3Q8TBE1 160 aa21.79■■□□□ 1.08
TRIM28-204ENST00000594806 JAM3Q9BX67 310 aa21.79■■□□□ 1.08
TRIM28-204ENST00000594806 GCM1Q9NP62 436 aa21.79■■□□□ 1.08
TRIM28-204ENST00000594806 FGF20Q9NP95 211 aaPredicted RBP21.79■■□□□ 1.08
TRIM28-204ENST00000594806 TMEM106BQ9NUM4 274 aa21.79■■□□□ 1.08
TRIM28-204ENST00000594806 GNG8Q9UK08 70 aa21.79■■□□□ 1.08
TRIM28-204ENST00000594806 GTF2A1LQ9UNN4 478 aa21.79■■□□□ 1.08
TRIM28-204ENST00000594806 MPC1Q9Y5U8 109 aa21.79■■□□□ 1.08
TRIM28-204ENST00000594806 CSPG4Q6UVK1 2322 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 IGHV4-61A0A0C4DH41 118 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 FAM20BO75063 409 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 PTBP3O95758 552 aaKnown RBP21.78■■□□□ 1.08
TRIM28-204ENST00000594806 CST4P01036 141 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 DCKP27707 260 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 GNALP38405 381 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 MAB21L1Q13394 359 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 TMEM249Q2WGJ8 235 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 CLEC9AQ6UXN8 241 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 THAP5Q7Z6K1 395 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 CATSPERDQ86XM0 798 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 SYS1Q8N2H4 156 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 MAPK1IP1LQ8NDC0 245 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 CCDC54Q8NEL0 328 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 OR51E1Q8TCB6 317 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 HAVCR2Q8TDQ0 301 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 RORBQ92753 470 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 GPR84Q9NQS5 396 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 C14orf119Q9NWQ9 140 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 CACNG2Q9Y698 323 aa21.78■■□□□ 1.08
TRIM28-204ENST00000594806 ATP6V1G2O95670 118 aa21.77■■□□□ 1.08
TRIM28-204ENST00000594806 MRPL28Q13084 256 aaKnown RBP21.77■■□□□ 1.08
TRIM28-204ENST00000594806 SMN1Q16637 294 aaKnown RBP21.77■■□□□ 1.08
TRIM28-204ENST00000594806 TP53I3Q53FA7 332 aa21.77■■□□□ 1.08
TRIM28-204ENST00000594806 COMMD2Q86X83 199 aa21.77■■□□□ 1.08
TRIM28-204ENST00000594806 OR52I1Q8NGK6 324 aa21.77■■□□□ 1.08
TRIM28-204ENST00000594806 FBLIM1Q8WUP2 373 aa21.77■■□□□ 1.08
TRIM28-204ENST00000594806 ALG8Q9BVK2 526 aa21.77■■□□□ 1.08
TRIM28-204ENST00000594806 MYRFQ9Y2G1 1151 aa21.77■■□□□ 1.08
TRIM28-204ENST00000594806 TEP1Q99973 2627 aaKnown RBP21.76■■□□□ 1.07
TRIM28-204ENST00000594806 LRRC30A6NM36 301 aa21.76■■□□□ 1.07
TRIM28-204ENST00000594806 ANXA2P2A6NMY6 339 aa21.76■■□□□ 1.07
TRIM28-204ENST00000594806 DHRS7CA6NNS2 312 aa21.76■■□□□ 1.07
TRIM28-204ENST00000594806 DHRS3O75911 302 aa21.76■■□□□ 1.07
TRIM28-204ENST00000594806 HEXAP06865 529 aa21.76■■□□□ 1.07
TRIM28-204ENST00000594806 GNAO1P09471 354 aa21.76■■□□□ 1.07
TRIM28-204ENST00000594806 GZMKP49863 264 aa21.76■■□□□ 1.07
TRIM28-204ENST00000594806 RIPPLY1Q0D2K3 151 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms