RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 GLCCI1Q86VQ1 547 aa16.96■□□□□ 0.31
LSM4-203ENST00000593829 PIGTQ969N2 578 aa16.96■□□□□ 0.31
LSM4-203ENST00000593829 C1orf198Q9H425 327 aa16.96■□□□□ 0.31
LSM4-203ENST00000593829 CMC2Q9NRP2 79 aa16.96■□□□□ 0.31
LSM4-203ENST00000593829 TMA7Q9Y2S6 64 aaKnown RBP16.96■□□□□ 0.31
LSM4-203ENST00000593829 HSPB11Q9Y547 144 aa16.96■□□□□ 0.31
LSM4-203ENST00000593829 ROS1P08922 2347 aa16.96■□□□□ 0.31
LSM4-203ENST00000593829 MPZL1O95297 269 aa16.96■□□□□ 0.3
LSM4-203ENST00000593829 LALBAP00709 142 aa16.96■□□□□ 0.3
LSM4-203ENST00000593829 ZNF3P17036 446 aa16.96■□□□□ 0.3
LSM4-203ENST00000593829 LSM6P62312 80 aaKnown RBP16.96■□□□□ 0.3
LSM4-203ENST00000593829 CRMP1Q14194 572 aa16.96■□□□□ 0.3
LSM4-203ENST00000593829 KCNMB1Q16558 191 aa16.96■□□□□ 0.3
LSM4-203ENST00000593829 PABPC1L2AQ5JQF8 200 aa16.96■□□□□ 0.3
LSM4-203ENST00000593829 OR2T4Q8NH00 348 aa16.96■□□□□ 0.3
LSM4-203ENST00000593829 C11orf40Q8WZ69 217 aa16.96■□□□□ 0.3
LSM4-203ENST00000593829 TEX12Q9BXU0 123 aa16.96■□□□□ 0.3
LSM4-203ENST00000593829 CYSLTR2Q9NS75 346 aa16.96■□□□□ 0.3
LSM4-203ENST00000593829 CSMD1Q96PZ7 3565 aa16.95■□□□□ 0.3
LSM4-203ENST00000593829 HEATR1Q9H583 2144 aaKnown RBP16.95■□□□□ 0.3
LSM4-203ENST00000593829 NAV2Q8IVL1 2488 aa16.95■□□□□ 0.3
LSM4-203ENST00000593829 HMGN1P05114 100 aa16.95■□□□□ 0.3
LSM4-203ENST00000593829 DANCRP0C864 163 aa16.95■□□□□ 0.3
LSM4-203ENST00000593829 ZNF35P13682 527 aa16.95■□□□□ 0.3
LSM4-203ENST00000593829 PSG4Q00888 419 aa16.95■□□□□ 0.3
LSM4-203ENST00000593829 HSD17B12Q53GQ0 312 aa16.95■□□□□ 0.3
LSM4-203ENST00000593829 SMUG1Q53HV7 270 aa16.95■□□□□ 0.3
LSM4-203ENST00000593829 ZBTB37Q5TC79 503 aa16.95■□□□□ 0.3
LSM4-203ENST00000593829 SLC30A7Q8NEW0 376 aa16.95■□□□□ 0.3
LSM4-203ENST00000593829 MBD6Q96DN6 1003 aa16.95■□□□□ 0.3
LSM4-203ENST00000593829 OR2H1Q9GZK4 316 aa16.95■□□□□ 0.3
LSM4-203ENST00000593829 ELF5Q9UKW6 265 aaPredicted RBP16.95■□□□□ 0.3
LSM4-203ENST00000593829 LAMP3Q9UQV4 416 aa16.95■□□□□ 0.3
LSM4-203ENST00000593829 MAST4O15021 2626 aa16.95■□□□□ 0.3
LSM4-203ENST00000593829 SHISA3A0PJX4 238 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 FAM171A2A8MVW0 826 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 LEUTXA8MZ59 168 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 GPANK1O95872 356 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 HTR1FP30939 366 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 FABP6P51161 128 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 DBPQ10586 325 aaPredicted RBP16.94■□□□□ 0.3
LSM4-203ENST00000593829 IDO2Q6ZQW0 420 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 LRRC28Q86X40 367 aaPredicted RBP16.94■□□□□ 0.3
LSM4-203ENST00000593829 NUP37Q8NFH4 326 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 OR1J2Q8NGS2 313 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 CITED4Q96RK1 184 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 RANBP3Q9H6Z4 567 aaPredicted RBP16.94■□□□□ 0.3
LSM4-203ENST00000593829 LOC105371267A0A1B0GV96 52 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 SMIM30A4D0T7 59 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 TPD52L2O43399 206 aaKnown RBP16.94■□□□□ 0.3
LSM4-203ENST00000593829 SOD3P08294 240 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 SLC25A1P53007 311 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 HGFACQ04756 655 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 GPR176Q14439 515 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 TMEM91Q6ZNR0 172 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 CPEB3Q8NE35 698 aaKnown RBP16.94■□□□□ 0.3
LSM4-203ENST00000593829 SLC26A10Q8NG04 563 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 AKR7LQ8NHP1 331 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 TMEM171Q8WVE6 324 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 NMNAT2Q9BZQ4 307 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 WNT5BQ9H1J7 359 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 CA10Q9NS85 328 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 ING4Q9UNL4 249 aa16.94■□□□□ 0.3
LSM4-203ENST00000593829 J3QRE1 110 aa16.93■□□□□ 0.3
LSM4-203ENST00000593829 SURF4O15260 269 aa16.93■□□□□ 0.3
LSM4-203ENST00000593829 HLA-DQA2P01906 255 aa16.93■□□□□ 0.3
LSM4-203ENST00000593829 APOBEC3AP31941 199 aaPredicted RBP16.93■□□□□ 0.3
LSM4-203ENST00000593829 PYCR1P32322 319 aa16.93■□□□□ 0.3
LSM4-203ENST00000593829 APLNRP35414 380 aa16.93■□□□□ 0.3
LSM4-203ENST00000593829 SCRN3Q0VDG4 424 aa16.93■□□□□ 0.3
LSM4-203ENST00000593829 TBC1D28Q2M2D7 210 aa16.93■□□□□ 0.3
LSM4-203ENST00000593829 DEFB113Q30KQ7 82 aa16.93■□□□□ 0.3
LSM4-203ENST00000593829 OTPQ5XKR4 325 aa16.93■□□□□ 0.3
LSM4-203ENST00000593829 ZNF57Q68EA5 555 aaPredicted RBP16.93■□□□□ 0.3
LSM4-203ENST00000593829 FBXL14Q8N1E6 418 aa16.93■□□□□ 0.3
LSM4-203ENST00000593829 IGFBPL1Q8WX77 278 aa16.93■□□□□ 0.3
LSM4-203ENST00000593829 CDH20Q9HBT6 801 aa16.93■□□□□ 0.3
LSM4-203ENST00000593829 BEX4Q9NWD9 120 aaPredicted RBP16.93■□□□□ 0.3
LSM4-203ENST00000593829 EIF3KQ9UBQ5 218 aaKnown RBP16.93■□□□□ 0.3
LSM4-203ENST00000593829 POLR1DQ9Y2S0 133 aa16.93■□□□□ 0.3
LSM4-203ENST00000593829 SPEF1Q9Y4P9 236 aa16.93■□□□□ 0.3
LSM4-203ENST00000593829 RGS9O75916 674 aaPredicted RBP16.92■□□□□ 0.3
LSM4-203ENST00000593829 APOL3O95236 402 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 DHFRP00374 187 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 TFP02787 698 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 ELK1P19419 428 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 CELP19835 753 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 STOMP27105 288 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 MEP1BQ16820 701 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 ZNF322Q6U7Q0 402 aaPredicted RBP16.92■□□□□ 0.3
LSM4-203ENST00000593829 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.92■□□□□ 0.3
LSM4-203ENST00000593829 LHFPL3Q86UP9 236 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 MUC15Q8N387 334 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 OR10H5Q8NGA6 315 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 TMED9Q9BVK6 235 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 ASH2LQ9UBL3 628 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 EXTL2Q9UBQ6 330 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 SLC23A1Q9UHI7 598 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 CCL2P13500 99 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 PAICSP22234 425 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms