RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 UBE2FQ969M7 185 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 ATF6BQ99941 703 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 ADAT1Q9BUB4 502 aaKnown RBP12.24□□□□□ -0.45
PNKP-202ENST00000593706 FN3KRPQ9HA64 309 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 CMC2Q9NRP2 79 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 C1RLQ9NZP8 487 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 ERVK-18Q9QC07 812 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 NOP16Q9Y3C1 178 aaKnown RBP12.24□□□□□ -0.45
PNKP-202ENST00000593706 POMT1Q9Y6A1 747 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 A0A0G2JK05 382 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 CLPSL1A2RUU4 121 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 TIMM23O14925 209 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 GSC2O15499 205 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 HLA-DQA2P01906 255 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 CLUP10909 449 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 SPI1P17947 270 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 PSMB10P40306 273 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 RPS27P42677 84 aaKnown RBP12.23□□□□□ -0.45
PNKP-202ENST00000593706 RELBQ01201 579 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 ECH1Q13011 328 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 OR8B8Q15620 311 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 MPPED2Q15777 294 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 OCLNQ16625 522 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 METTL11BQ5VVY1 283 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 SFRP4Q6FHJ7 346 aaPredicted RBP12.23□□□□□ -0.45
PNKP-202ENST00000593706 ZNF841Q6ZN19 808 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 HS3ST5Q8IZT8 346 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 IQCF1Q8N6M8 205 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 PNLDC1Q8NA58 520 aaKnown RBP12.23□□□□□ -0.45
PNKP-202ENST00000593706 PROKR2Q8NFJ6 384 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 OR51L1Q8NGJ5 315 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 SSMEM1Q8WWF3 244 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 CITED1Q99966 193 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 MMP27Q9H306 513 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 ACOXLQ9NUZ1 547 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 RNF7Q9UBF6 113 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 CTSZQ9UBR2 303 aa12.23□□□□□ -0.45
PNKP-202ENST00000593706 TVP23AA6NH52 213 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 C3orf80F5H4A9 247 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 ADAM20O43506 726 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 FKBP6O75344 327 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 GYPBP06028 91 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 LIPFP07098 398 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 CA6P23280 308 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 GRK5P34947 590 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 HOXA4Q00056 320 aaPredicted RBP12.22□□□□□ -0.45
PNKP-202ENST00000593706 TEX30Q5JUR7 227 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 SCCPDHQ8NBX0 429 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 TBC1D15Q8TC07 691 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 DYRK2Q92630 601 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 WDFY2Q96P53 400 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 TBX15Q96SF7 602 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 SLC22A4Q9H015 551 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 TRIM36Q9NQ86 728 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 RNF114Q9Y508 228 aa12.22□□□□□ -0.45
PNKP-202ENST00000593706 CENPVL3A0A0U1RRI6 287 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 C5orf63A6NC05 138 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 RIIAD1A6NNX1 92 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 M0R135 149 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 LGALS8O00214 317 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 TNFRSF13BO14836 293 aaPredicted RBP12.21□□□□□ -0.45
PNKP-202ENST00000593706 MMP9P14780 707 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 TPTEP56180 551 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 RPL15P61313 204 aaKnown RBP12.21□□□□□ -0.45
PNKP-202ENST00000593706 CBX1P83916 185 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 NAA40Q86UY6 237 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 SPATA24Q86W54 205 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 ZNF511Q8NB15 262 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 TEX47Q8TBZ9 253 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 LHX4Q969G2 390 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 SPTSSAQ969W0 71 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 UTP4Q969X6 686 aaKnown RBP12.21□□□□□ -0.45
PNKP-202ENST00000593706 ZNF799Q96GE5 643 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 DNAJB9Q9UBS3 223 aa12.21□□□□□ -0.45
PNKP-202ENST00000593706 TRAV38-1A0A0B4J264 116 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 IGHV1-69DA0A0B4J2H0 117 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 hCG_1807616A0A1W2PRN6 198 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 GGT3PA6NGU5 568 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 A6NLC8 198 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 GPR137BO60478 399 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 IFNGP01579 166 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 IGHV1-69P01742 117 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 ZNF823P16415 610 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 ZNF3P17036 446 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 ENTPD1P49961 510 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 DCXRQ7Z4W1 244 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 PKP2Q99959 881 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 MED20Q9H944 212 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 SMURF1Q9HCE7 757 aa12.2□□□□□ -0.46
PNKP-202ENST00000593706 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.19□□□□□ -0.46
PNKP-202ENST00000593706 OOEPA6NGQ2 149 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 FAM183AA6NL82 134 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 CD300LBA8K4G0 201 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 NDUFA2O43678 99 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 GMDSO60547 372 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 IGHV4-59P01825 116 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 GYPAP02724 150 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 OSMP13725 252 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 PRKACGP22612 351 aa12.19□□□□□ -0.46
PNKP-202ENST00000593706 FMO3P31513 532 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms