RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 Q8N7P7 452 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 PLPP7Q8NBV4 271 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 PROKR2Q8NFJ6 384 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 GNPDA2Q8TDQ7 276 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 SSMEM1Q8WWF3 244 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 SLAMF6Q96DU3 332 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 AMELYQ99218 206 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 CCL13Q99616 98 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 KRCC1Q9NPI7 259 aaPredicted RBP8.77□□□□□ -1.01
USE1-203ENST00000593597 RPUSD1Q9UJJ7 312 aaKnown RBP8.77□□□□□ -1.01
USE1-203ENST00000593597 TRAV38-1A0A0B4J264 116 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 hCG_38984A0A1B0GV85 526 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 DHRS12A0PJE2 317 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 A6NLC8 198 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 RNASEK-C17orf49H0YIS7 233 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 NDUFAB1O14561 156 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 ACOT8O14734 319 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 PLXNB1O43157 2135 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 FABP3P05413 133 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 LIPFP07098 398 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 SPARCP09486 303 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 HSD17B1P14061 328 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 ATP6V1B2P21281 511 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 PRDX6P30041 224 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 ENTPD1P49961 510 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 KLRD1Q13241 179 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 PDCD1Q15116 288 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 METTL11BQ5VVY1 283 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 WDR82Q6UXN9 313 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 SLC16A9Q7RTY1 509 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 PNKDQ8N490 385 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 PNLDC1Q8NA58 520 aaKnown RBP8.76□□□□□ -1.01
USE1-203ENST00000593597 LRRC29Q8WV35 223 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 ST8SIA4Q92187 359 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 DYRK2Q92630 601 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 TNFRSF14Q92956 283 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 SPTSSAQ969W0 71 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 CCT8L2Q96SF2 557 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 KCNJ15Q99712 375 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 ELAC2Q9BQ52 826 aaKnown RBP8.76□□□□□ -1.01
USE1-203ENST00000593597 COPS4Q9BT78 406 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 SLC22A4Q9H015 551 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 MMP27Q9H306 513 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 IL1RAPQ9NPH3 570 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 IL20Q9NYY1 176 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 ZNRD1Q9P1U0 126 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 MAGEL2Q9UJ55 1249 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 RNF114Q9Y508 228 aa8.76□□□□□ -1.01
USE1-203ENST00000593597 hCG_1807616A0A1W2PRN6 198 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 GASTP01350 101 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 CRYBA1P05813 215 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 ZNF823P16415 610 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 SPI1P17947 270 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 HMGA2P52926 109 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 SMIM11AP58511 58 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 RPL15P61313 204 aaKnown RBP8.75□□□□□ -1.01
USE1-203ENST00000593597 CDONQ4KMG0 1287 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 STUMQ69YW2 141 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 C1QL4Q86Z23 238 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 ZSCAN4Q8NAM6 433 aaPredicted RBP8.75□□□□□ -1.01
USE1-203ENST00000593597 OR1M1Q8NGA1 313 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 OR2T4Q8NH00 348 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 SGK3Q96BR1 496 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 CMTM5Q96DZ9 223 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 PKP2Q99959 881 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 TRIM15Q9C019 465 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 NSRP1Q9H0G5 558 aaKnown RBP8.75□□□□□ -1.01
USE1-203ENST00000593597 TLNRD1Q9H1K6 362 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 SIRT7Q9NRC8 400 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 CENPMQ9NSP4 180 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 ARMC1Q9NVT9 282 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 N6AMT1Q9Y5N5 214 aa8.75□□□□□ -1.01
USE1-203ENST00000593597 DSCAML1Q8TD84 2053 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 A0A1W2PRD5 423 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 A0A1W2PRF3 423 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 A0A1W2PRM7 423 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 TCRBV5S2A0A599 114 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 ZNF878C9JN71 531 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 ZNF593O00488 134 aaPredicted RBP8.74□□□□□ -1.01
USE1-203ENST00000593597 XRCC2O43543 280 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 NDUFA2O43678 99 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 SOX14O95416 240 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 ACKR3P25106 362 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 MAGEA2P43356 314 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 TGM4P49221 684 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 CX3CR1P49238 355 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 SLC25A1P53007 311 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 MXRA7P84157 204 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 KCNJ8Q15842 424 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 TEX30Q5JUR7 227 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 HCP5Q6MZN7 132 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 RASSF6Q6ZTQ3 369 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 PGAM4Q8N0Y7 254 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 OR5T2Q8NGG2 359 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 TBC1D15Q8TC07 691 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 C17orf50Q8WW18 174 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 ITPKCQ96DU7 683 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 AJUBAQ96IF1 538 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 NSMCE2Q96MF7 247 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 WDR13Q9H1Z4 485 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms