RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 DVL1O14640 695 aa19.76■□□□□ 0.75
LSM4-202ENST00000593564 ARF6P62330 175 aa19.76■□□□□ 0.75
LSM4-202ENST00000593564 MIDNQ504T8 468 aa19.76■□□□□ 0.75
LSM4-202ENST00000593564 ZNF770Q6IQ21 691 aaPredicted RBP19.76■□□□□ 0.75
LSM4-202ENST00000593564 BRICD5Q6PL45 260 aa19.76■□□□□ 0.75
LSM4-202ENST00000593564 RASSF6Q6ZTQ3 369 aa19.76■□□□□ 0.75
LSM4-202ENST00000593564 NMNAT2Q9BZQ4 307 aa19.76■□□□□ 0.75
LSM4-202ENST00000593564 RNPEPL1Q9HAU8 725 aa19.76■□□□□ 0.75
LSM4-202ENST00000593564 N6AMT1Q9Y5N5 214 aa19.76■□□□□ 0.75
LSM4-202ENST00000593564 ANKRD30BLA7E2S9 258 aa19.75■□□□□ 0.75
LSM4-202ENST00000593564 TNFRSF11BO00300 401 aa19.75■□□□□ 0.75
LSM4-202ENST00000593564 ZNF593O00488 134 aaPredicted RBP19.75■□□□□ 0.75
LSM4-202ENST00000593564 SNX3O60493 162 aa19.75■□□□□ 0.75
LSM4-202ENST00000593564 SLC25A1P53007 311 aa19.75■□□□□ 0.75
LSM4-202ENST00000593564 CRMP1Q14194 572 aa19.75■□□□□ 0.75
LSM4-202ENST00000593564 LDLRAD3Q86YD5 345 aa19.75■□□□□ 0.75
LSM4-202ENST00000593564 ZNF511Q8NB15 262 aa19.75■□□□□ 0.75
LSM4-202ENST00000593564 OR8S1Q8NH09 359 aa19.75■□□□□ 0.75
LSM4-202ENST00000593564 TBC1D23Q9NUY8 699 aa19.75■□□□□ 0.75
LSM4-202ENST00000593564 IGHV3OR15-7A0A075B7D8 119 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 GASTP01350 101 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 MUC1P15941 1255 aaPredicted RBP19.74■□□□□ 0.75
LSM4-202ENST00000593564 SPI1P17947 270 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 GRK5P34947 590 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 SLC15A1P46059 708 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 GRB2P62993 217 aaKnown RBP19.74■□□□□ 0.75
LSM4-202ENST00000593564 POU4F2Q12837 409 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 MICBQ29980 383 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 SPATS1Q496A3 300 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 CDONQ4KMG0 1287 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 SLC16A9Q7RTY1 509 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 WDR86Q86TI4 376 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 C11orf53Q8IXP5 236 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 TSSK6Q9BXA6 273 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 FAM107BQ9H098 131 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 CNTD2Q9H8S5 307 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 RPUSD1Q9UJJ7 312 aaKnown RBP19.74■□□□□ 0.75
LSM4-202ENST00000593564 BAIAP2Q9UQB8 552 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 KPTNQ9Y664 436 aa19.74■□□□□ 0.75
LSM4-202ENST00000593564 A0A0U1RQK1 487 aa19.73■□□□□ 0.75
LSM4-202ENST00000593564 DHRS12A0PJE2 317 aa19.73■□□□□ 0.75
LSM4-202ENST00000593564 GPR137BO60478 399 aa19.73■□□□□ 0.75
LSM4-202ENST00000593564 CCNB2O95067 398 aa19.73■□□□□ 0.75
LSM4-202ENST00000593564 IGHV4-59P01825 116 aa19.73■□□□□ 0.75
LSM4-202ENST00000593564 GYPBP06028 91 aa19.73■□□□□ 0.75
LSM4-202ENST00000593564 IER3P46695 156 aa19.73■□□□□ 0.75
LSM4-202ENST00000593564 BLVRAP53004 296 aa19.73■□□□□ 0.75
LSM4-202ENST00000593564 FAM3AP98173 230 aa19.73■□□□□ 0.75
LSM4-202ENST00000593564 SCCPDHQ8NBX0 429 aa19.73■□□□□ 0.75
LSM4-202ENST00000593564 LRRC29Q8WV35 223 aa19.73■□□□□ 0.75
LSM4-202ENST00000593564 ST8SIA4Q92187 359 aa19.73■□□□□ 0.75
LSM4-202ENST00000593564 TOR3AQ9H497 397 aa19.73■□□□□ 0.75
LSM4-202ENST00000593564 M0QZ24 198 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 TBX1O43435 398 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 MAGEA2P43356 314 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 CX3CR1P49238 355 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 PRKDCP78527 4128 aaKnown RBP19.72■□□□□ 0.75
LSM4-202ENST00000593564 TIGD6Q17RP2 521 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 RHOUQ7L0Q8 258 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 DPY19L4Q7Z388 723 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 AQP11Q8NBQ7 271 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 OR1M1Q8NGA1 313 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 OR6K6Q8NGW6 343 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 OR4Q3Q8NH05 313 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 DMRTB1Q96MA1 342 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 CCT8L2Q96SF2 557 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 SP140LQ9H930 580 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 TAGLN3Q9UI15 199 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 RNF114Q9Y508 228 aa19.72■□□□□ 0.75
LSM4-202ENST00000593564 hCG_38984A0A1B0GV85 526 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 A0A1B0GVI7 797 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 A0A1B0GW55 424 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 TIMM23O14925 209 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 TIPRLO75663 272 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 ANXA2P07355 339 aaKnown RBP19.71■□□□□ 0.75
LSM4-202ENST00000593564 DUX4L2P0CJ85 424 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 DUX4L3P0CJ86 424 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 DUX4L4P0CJ87 422 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 DUX4L5P0CJ88 424 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 DUX4L6P0CJ89 424 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 DUX4L7P0CJ90 424 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 CLUP10909 449 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 KRTAP10-3P60369 221 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 DUX4L9Q6RFH8 374 aaPredicted RBP19.71■□□□□ 0.75
LSM4-202ENST00000593564 WDR82Q6UXN9 313 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 PRSS45Q7RTY3 260 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 VMO1Q7Z5L0 202 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 PIP4P2Q8N4L2 257 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 LY6G5BQ8NDX9 201 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 OR2T33Q8NG76 320 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 LINC01006Q8NI28 216 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 SGK3Q96BR1 496 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 REEP6Q96HR9 211 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 CCL13Q99616 98 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 MMP27Q9H306 513 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 NDE1Q9NXR1 346 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 DUX4Q9UBX2 424 aa19.71■□□□□ 0.75
LSM4-202ENST00000593564 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.7■□□□□ 0.74
LSM4-202ENST00000593564 CLPXO76031 633 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 IFNGP01579 166 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms