RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ACOT7LQ6ZUV0 252 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 HPS6Q86YV9 775 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 NAXDQ8IW45 347 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 C12orf29Q8N999 325 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 LFNGQ8NES3 379 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 OR1B1Q8NGR6 318 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 OR2Y1Q8NGV0 311 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 OR4Q3Q8NH05 313 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 C8orf46Q8TAG6 207 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 PLPPR1Q8TBJ4 325 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 DYNC2LI1Q8TCX1 351 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 ACER1Q8TDN7 264 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 NEK7Q8TDX7 302 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 TFGQ92734 400 aaPredicted RBP3.84□□□□□ -1.79
SMAD4-216ENST00000593223 UBE2E3Q969T4 207 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 PTH2Q96A98 100 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 RPEQ96AT9 228 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 APH1AQ96BI3 265 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 ERGIC2Q96RQ1 377 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 CLCC1Q96S66 551 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 STACQ99469 402 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 RBBP8Q99708 897 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 NIPSNAP1Q9BPW8 284 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 ZYG11BQ9C0D3 744 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 COMMD4Q9H0A8 199 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 METTL9Q9H1A3 318 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 PPA2Q9H2U2 334 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 GDF3Q9NR23 364 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 SLC2A9Q9NRM0 540 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 FGFR1OP2Q9NVK5 253 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 CMTM6Q9NX76 183 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 ZNF221Q9UK13 617 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 ALG6Q9Y672 507 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 FER1L5A0AVI2 2057 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 OR5H15A6NDH6 313 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 OR2AT4A6NND4 320 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 SRRM5B3KS81 715 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 C9J4A7 227 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 NEDD8-MDP1E9PL57 170 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 G3V4G9 280 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 H3BMH7 237 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 SULT1C2O00338 296 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 IMPA2O14732 288 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 TNFSF11O14788 317 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 PHF1O43189 567 aaPredicted RBP3.83□□□□□ -1.8
SMAD4-216ENST00000593223 ATP8B1O43520 1251 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 SRP72O76094 671 aaKnown RBP3.83□□□□□ -1.8
SMAD4-216ENST00000593223 RCBTB2O95199 551 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 UTS2O95399 124 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 AP2A1O95782 977 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 TSPAN13O95857 204 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 ORM1P02763 201 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 CDK1P06493 297 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 RHOCP08134 193 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 MELTFP08582 738 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 ZDHHC11BP0C7U3 371 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 HIST1H1CP16403 213 aaKnown RBP3.83□□□□□ -1.8
SMAD4-216ENST00000593223 FASP25445 335 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 RBM34P42696 430 aaKnown RBP3.83□□□□□ -1.8
SMAD4-216ENST00000593223 CYB561P49447 251 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 UGT2B15P54855 530 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 PKNOX1P55347 436 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 OR2B8PP59922 312 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 LSM6P62312 80 aaKnown RBP3.83□□□□□ -1.8
SMAD4-216ENST00000593223 TPBGQ13641 420 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 FLOT2Q14254 428 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 HAGHQ16775 308 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 ATP6V1FQ16864 119 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 C15orf32Q32M92 178 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 RFX4Q33E94 735 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 KRTAP21-3Q3LHN1 58 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 SLC25A52Q3SY17 297 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 TMEM176BQ3YBM2 270 aaPredicted RBP3.83□□□□□ -1.8
SMAD4-216ENST00000593223 EIPR1Q53HC9 387 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 TIMM23BQ5SRD1 257 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 EMBQ6PCB8 327 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 Q6ZSR3 168 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 LINC00336Q6ZUF6 198 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 APTXQ7Z2E3 356 aaKnown RBP3.83□□□□□ -1.8
SMAD4-216ENST00000593223 CEACAM19Q7Z692 300 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 TMEM25Q86YD3 366 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 CALHM1Q8IU99 346 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 C2orf73Q8N5S3 287 aaPredicted RBP3.83□□□□□ -1.8
SMAD4-216ENST00000593223 TMEM35BQ8NCS4 154 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 CCDC54Q8NEL0 328 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 ATP6V1C2Q8NEY4 427 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 PIGXQ8TBF5 258 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 APH1BQ8WW43 257 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 NELFBQ8WX92 580 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 CXorf40BQ96DE9 158 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 CCDC126Q96EE4 140 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 SGTBQ96EQ0 304 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 CENPNQ96H22 339 aaPredicted RBP3.83□□□□□ -1.8
SMAD4-216ENST00000593223 ZNF641Q96N77 438 aaPredicted RBP3.83□□□□□ -1.8
SMAD4-216ENST00000593223 RCHY1Q96PM5 261 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 NIPSNAP3BQ9BS92 247 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 RAB34Q9BZG1 259 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 ACTR3CQ9C0K3 210 aaPredicted RBP3.83□□□□□ -1.8
SMAD4-216ENST00000593223 FAM107BQ9H098 131 aa3.83□□□□□ -1.8
SMAD4-216ENST00000593223 OR51M1Q9H341 326 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms