RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 DEFB124Q8NES8 71 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 OR2M7Q8NG81 312 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 OR10R2Q8NGX6 335 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 SPTSSAQ969W0 71 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 ZNF775Q96BV0 537 aaPredicted RBP17.27■□□□□ 0.36
CLIP3-206ENST00000593074 ZNF799Q96GE5 643 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 LPAR5Q9H1C0 372 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 EXO5Q9H790 373 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 UPB1Q9UBR1 384 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 CST2P09228 141 aa17.27■□□□□ 0.35
CLIP3-206ENST00000593074 PRF1P14222 555 aa17.27■□□□□ 0.35
CLIP3-206ENST00000593074 CRYGSP22914 178 aa17.27■□□□□ 0.35
CLIP3-206ENST00000593074 OR1C1Q15619 314 aa17.27■□□□□ 0.35
CLIP3-206ENST00000593074 IDO2Q6ZQW0 420 aa17.27■□□□□ 0.35
CLIP3-206ENST00000593074 TRAPPC6BQ86SZ2 158 aa17.27■□□□□ 0.35
CLIP3-206ENST00000593074 CCDC54Q8NEL0 328 aa17.27■□□□□ 0.35
CLIP3-206ENST00000593074 CPT1CQ8TCG5 803 aa17.27■□□□□ 0.35
CLIP3-206ENST00000593074 ROBO4Q8WZ75 1007 aa17.27■□□□□ 0.35
CLIP3-206ENST00000593074 CPNE4Q96A23 557 aaPredicted RBP17.27■□□□□ 0.35
CLIP3-206ENST00000593074 CRLF2Q9HC73 371 aa17.27■□□□□ 0.35
CLIP3-206ENST00000593074 TMEM38BQ9NVV0 291 aa17.27■□□□□ 0.35
CLIP3-206ENST00000593074 PCNX2A6NKB5 2137 aa17.27■□□□□ 0.35
CLIP3-206ENST00000593074 LINC01387J3KSC0 135 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 ALX3O95076 343 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 AMY2AP04746 511 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 TPOP07202 933 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 CHRM2P08172 466 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 UBBP0CG47 229 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 RAP2BP61225 183 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 MEF2DQ14814 521 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 RAB35Q15286 201 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 LINC00696Q6ZRV3 163 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 CHMP1BQ7LBR1 199 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 AAED1Q7RTV5 226 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 CHST4Q8NCG5 386 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 TMEM104Q8NE00 496 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 KCNG3Q8TAE7 436 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 RADILQ96JH8 1075 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 ZNF703Q9H7S9 590 aaPredicted RBP17.26■□□□□ 0.35
CLIP3-206ENST00000593074 SLC2A8Q9NY64 477 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 PLA2G3Q9NZ20 509 aa17.26■□□□□ 0.35
CLIP3-206ENST00000593074 CDC14BO60729 498 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 CYTIPO60759 359 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 DBHP09172 617 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 MPZP25189 248 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 RIPPLY2Q5TAB7 128 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 DTX1Q86Y01 620 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 PP6455Q8WZ26 134 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 SNAPC3Q92966 411 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 C10orf35Q96D05 121 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 MYOZ1Q9NP98 299 aaPredicted RBP17.25■□□□□ 0.35
CLIP3-206ENST00000593074 ZNF224Q9NZL3 707 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 B4GALT7Q9UBV7 327 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 CACNA1HO95180 2353 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 A0A0A6YYD4 124 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 SGCEO43556 437 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 SYNGR3O43761 229 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 LRP3O75074 770 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 FTH1P19P0C7X4 201 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 GNB3P16520 340 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 LGALSLQ3ZCW2 172 aaPredicted RBP17.25■□□□□ 0.35
CLIP3-206ENST00000593074 CRIP3Q6Q6R5 217 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 MUC20Q8N307 709 aaPredicted RBP17.25■□□□□ 0.35
CLIP3-206ENST00000593074 BPIFB2Q8N4F0 458 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 NUDCD2Q8WVJ2 157 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 ALKBH3Q96Q83 286 aaPredicted RBP17.25■□□□□ 0.35
CLIP3-206ENST00000593074 NICN1Q9BSH3 213 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 CHIAQ9BZP6 476 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 CHST5Q9GZS9 411 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 POFUT1Q9H488 388 aa17.25■□□□□ 0.35
CLIP3-206ENST00000593074 TMEM82A0PJX8 343 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 HOXD11P31277 338 aaPredicted RBP17.24■□□□□ 0.35
CLIP3-206ENST00000593074 PER3P56645 1201 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 DHODHQ02127 395 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 PDSS1Q5T2R2 415 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 DRAM2Q6UX65 266 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 SULF2Q8IWU5 870 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 OR4S1Q8NGB4 309 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 OR52H1Q8NGJ2 320 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 CCDC107Q8WV48 283 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 SLC6A7Q99884 636 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 TMEM59Q9BXS4 323 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 SELENOIQ9C0D9 397 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 CHST6Q9GZX3 395 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 HEXA-AS1Q9H8Q6 139 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 SPAARA0A1B0GVQ0 90 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 TOXO94900 526 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 HTR2BP41595 481 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 ALDH3B1P43353 468 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 ZMYND11Q15326 602 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 ZBTB37Q5TC79 503 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 OR2AK2Q8NG84 335 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 OR13C8Q8NGS7 320 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 GPER1Q99527 375 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 HES7Q9BYE0 225 aa17.24■□□□□ 0.35
CLIP3-206ENST00000593074 EIF3KQ9UBQ5 218 aaKnown RBP17.24■□□□□ 0.35
CLIP3-206ENST00000593074 OR14I1A6ND48 311 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 DISC1C4P0D8 188 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 SSX5O60225 188 aa17.23■□□□□ 0.35
CLIP3-206ENST00000593074 TSC22D2O75157 780 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms