RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 FCN3O75636 299 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 KRT36O76013 467 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 LHBP01229 141 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 IGHV4-59P01825 116 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 GRK5P34947 590 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 DDOSTP39656 456 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 PDZD9Q8IXQ8 264 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 LINC00471Q8N535 108 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 ZNF511Q8NB15 262 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 OR9Q2Q8NGE9 314 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 SPSB4Q96A44 273 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 CDRT15Q96T59 188 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 BTBD10Q9BSF8 475 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 CNTD2Q9H8S5 307 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 IL20Q9NYY1 176 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 CD300AQ9UGN4 299 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 RPUSD1Q9UJJ7 312 aaKnown RBP13□□□□□ -0.33
CIRBP-230ENST00000591055 RNF114Q9Y508 228 aa13□□□□□ -0.33
CIRBP-230ENST00000591055 ZNF878C9JN71 531 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 TNFRSF11BO00300 401 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 GYPBP06028 91 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 IER3P46695 156 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 HMGA2P52926 109 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 PCK2Q16822 640 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 TIGD6Q17RP2 521 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 MICBQ29980 383 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 RASSF6Q6ZTQ3 369 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 DPY19L4Q7Z388 723 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 LDLRAD3Q86YD5 345 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 PGAM4Q8N0Y7 254 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 OR8D4Q8NGM9 314 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 LRRC29Q8WV35 223 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 CCL13Q99616 98 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 TSSK6Q9BXA6 273 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 MMP27Q9H306 513 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 RNPEPL1Q9HAU8 725 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 MED4Q9NPJ6 270 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 TBC1D23Q9NUY8 699 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 LYVE1Q9Y5Y7 322 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 KPTNQ9Y664 436 aa12.99□□□□□ -0.33
CIRBP-230ENST00000591055 GASTP01350 101 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 ANXA2P07355 339 aaKnown RBP12.98□□□□□ -0.33
CIRBP-230ENST00000591055 MUC1P15941 1255 aaPredicted RBP12.98□□□□□ -0.33
CIRBP-230ENST00000591055 SLC15A1P46059 708 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 CX3CR1P49238 355 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 SLC25A1P53007 311 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 KRTAP10-3P60369 221 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 GRB2P62993 217 aaKnown RBP12.98□□□□□ -0.33
CIRBP-230ENST00000591055 FAM3AP98173 230 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 CRMP1Q14194 572 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 CDONQ4KMG0 1287 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 TEX30Q5JUR7 227 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 RHOUQ7L0Q8 258 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 SLC16A9Q7RTY1 509 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 VMO1Q7Z5L0 202 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 C11orf53Q8IXP5 236 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 FGFRL1Q8N441 504 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 OR6K6Q8NGW6 343 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 LINC01006Q8NI28 216 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 FAM107BQ9H098 131 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 DPAGT1Q9H3H5 408 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 SP140LQ9H930 580 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 ONECUT1Q9UBC0 465 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 FAM96BQ9Y3D0 163 aa12.98□□□□□ -0.33
CIRBP-230ENST00000591055 A0A1B0GVI7 797 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 A0A1B0GW55 424 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 DHRS12A0PJE2 317 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 CLPXO76031 633 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 CCNB2O95067 398 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 DUX4L2P0CJ85 424 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 DUX4L3P0CJ86 424 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 DUX4L4P0CJ87 422 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 DUX4L5P0CJ88 424 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 DUX4L6P0CJ89 424 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 DUX4L7P0CJ90 424 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 SPI1P17947 270 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 HSD11B1P28845 292 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 NAA10P41227 235 aaPredicted RBP12.97□□□□□ -0.33
CIRBP-230ENST00000591055 ELF3P78545 371 aaPredicted RBP12.97□□□□□ -0.33
CIRBP-230ENST00000591055 EIF2B1Q14232 305 aaKnown RBP12.97□□□□□ -0.33
CIRBP-230ENST00000591055 WDR38Q5JTN6 314 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 ZNF770Q6IQ21 691 aaPredicted RBP12.97□□□□□ -0.33
CIRBP-230ENST00000591055 DUX4L9Q6RFH8 374 aaPredicted RBP12.97□□□□□ -0.33
CIRBP-230ENST00000591055 GDPGP1Q6ZNW5 385 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 SLC36A1Q7Z2H8 476 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 WDR86Q86TI4 376 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 OR1M1Q8NGA1 313 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 LRTOMTQ8WZ04 291 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 UBE2FQ969M7 185 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 SGK3Q96BR1 496 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 REEP6Q96HR9 211 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 RBM4BQ9BQ04 359 aaKnown RBP12.97□□□□□ -0.33
CIRBP-230ENST00000591055 NMNAT2Q9BZQ4 307 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 TOR3AQ9H497 397 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 DUX4Q9UBX2 424 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 BAIAP2Q9UQB8 552 aa12.97□□□□□ -0.33
CIRBP-230ENST00000591055 TIPRLO75663 272 aa12.96□□□□□ -0.33
CIRBP-230ENST00000591055 IFNGP01579 166 aa12.96□□□□□ -0.33
CIRBP-230ENST00000591055 APOC1P02654 83 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms