RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318		A0A1B0GTH9	108 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	UBE2QL1	A1L167	161 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	RAB19	A4D1S5	217 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	NPIPA2	E9PIF3	369 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	NPIPA3	F8WFD2	350 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZFPL1	O95159	310 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	FABP1	P07148	127 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	PVALB	P20472	110 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	LAP3	P28838	519 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	NTF4	P34130	210 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	GDNF	P39905	211 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZNF133	P52736	654 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	ALKBH1	Q13686	389 aa	Known RBP	13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	EIF2B1	Q14232	305 aa	Known RBP	13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	DEFB109B	Q30KR1	87 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	ACSM3	Q53FZ2	586 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	RNFT1	Q5M7Z0	435 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	PHYHD1	Q5SRE7	291 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	LIN54	Q6MZP7	749 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	CORO6	Q6QEF8	472 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	CEACAM19	Q7Z692	300 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	OR52N5	Q8NH56	324 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	ROBO4	Q8WZ75	1007 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	TMEM54	Q969K7	222 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZNF845	Q96IR2	970 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	TCEAL7	Q9BRU2	100 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	ELOVL3	Q9HB03	270 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	LAMA5	O15230	3695 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318	NCOA6	Q14686	2063 aa	Predicted RBP	13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	HSPB2	A8KAH6	182 aa		13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	GPRIN2	O60269	458 aa		13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	CEACAM4	O75871	244 aa		13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	ITGB2	P05107	769 aa		13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	QDPR	P09417	244 aa		13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	HSPB2	Q16082	182 aa		13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	LINC00346	Q8IVM7	164 aa		13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	OR2G2	Q8NGZ5	317 aa		13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	PHYHIPL	Q96FC7	376 aa		13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	HRASLS	Q9HDD0	168 aa		13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	TAS2R3	Q9NYW6	316 aa		13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	EDAR	Q9UNE0	448 aa		13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	FLVCR1	Q9Y5Y0	555 aa		13.58	□□□□□ -0.23
DDX39A-209	ENST00000589318	GABARAP	H6UMI1	98 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	GFRA3	O60609	400 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	ZNF823	P16415	610 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	MGMT	P16455	207 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	ZNF708	P17019	499 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	CDA	P32320	146 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	VEGFC	P49767	419 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	PPIA	P62937	165 aa	Known RBP	13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	SFRP5	Q5T4F7	317 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	FDX2	Q6P4F2	183 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	UNQ9370/PRO34162	Q6UXP9	181 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	MOB3C	Q70IA8	216 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	DCXR	Q7Z4W1	244 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	PRSS35	Q8N3Z0	413 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	RNF128	Q8TEB7	428 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	SFT2D1	Q8WV19	159 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	CPNE4	Q96A23	557 aa	Predicted RBP	13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	ZFP3	Q96NJ6	502 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	ACKR4	Q9NPB9	350 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	RASL12	Q9NYN1	266 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	ZNF69	Q9UC07	566 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	ZNF281	Q9Y2X9	895 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	LIPG	Q9Y5X9	500 aa		13.58	□□□□□ -0.24
DDX39A-209	ENST00000589318	OR4C45	A6NMZ5	311 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	POM121C	A8CG34	1229 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	NUDT19	A8MXV4	375 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	ARPC5	O15511	151 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	TLX3	O43711	291 aa	Predicted RBP	13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	PNP	P00491	289 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	SPINK2	P20155	84 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	KIR3DL2	P43630	455 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	CSNK1A1	P48729	337 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	UBE2NL	Q5JXB2	153 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	C10orf128	Q5T292	105 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	KCTD18	Q6PI47	426 aa	Predicted RBP	13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	TMEM178A	Q8NBL3	297 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	GLYATL2	Q8WU03	294 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	OR14A2	Q96R54	314 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	NOX3	Q9HBY0	568 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	OPN4	Q9UHM6	478 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	LRP12	Q9Y561	859 aa		13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.57	□□□□□ -0.24
DDX39A-209	ENST00000589318		A0A0D9SG52	128 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	CYTIP	O60759	359 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	SRSF10	O75494	262 aa	Known RBP	13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	HEXA	P06865	529 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	UCHL1	P09936	223 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	S100P	P25815	95 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	AGTR1	P30556	359 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	KCNMB1	Q16558	191 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	OR7E24	Q6IFN5	339 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	OR10S1	Q8NGN2	331 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	OR10K1	Q8NGX5	313 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	ZNF775	Q96BV0	537 aa	Predicted RBP	13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	C4orf45	Q96LM5	186 aa		13.56	□□□□□ -0.24
DDX39A-209	ENST00000589318	ZDHHC11	Q9H8X9	412 aa		13.56	□□□□□ -0.24

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