RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 CALRP27797 417 aaKnown RBP12.85□□□□□ -0.35
NFIX-208ENST00000587260 SOX2P48431 317 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 SERPINB10P48595 397 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 ERVS71-1P61550 626 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 SNTB2Q13425 540 aaKnown RBP12.85□□□□□ -0.35
NFIX-208ENST00000587260 HSD17B12Q53GQ0 312 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 SPATA46Q5T0L3 261 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 FAM27D1Q5T7N8 215 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 SLC22A25Q6T423 547 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 OR5L1Q8NGL2 311 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 OR13C3Q8NGS6 347 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 FAM222BQ8WU58 562 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 REEP6Q96HR9 211 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 HS3ST6Q96QI5 342 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 SOX7Q9BT81 388 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 REPIN1Q9BWE0 567 aaKnown RBP12.85□□□□□ -0.35
NFIX-208ENST00000587260 POFUT1Q9H488 388 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 OPA3Q9H6K4 179 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 STARD10Q9Y365 291 aa12.85□□□□□ -0.35
NFIX-208ENST00000587260 H3BSH0 61 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 CD3EP07766 207 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 FSTP19883 344 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 SDC2P34741 201 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 RPS19P39019 145 aaKnown RBP12.84□□□□□ -0.35
NFIX-208ENST00000587260 UCP2P55851 309 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 PRSS12P56730 875 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 ZNF92Q03936 586 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 MALLQ13021 153 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 OR8B8Q15620 311 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 VHLLQ6RSH7 139 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 UNQ6126/PRO20091Q6UXV3 157 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 KRT74Q7RTS7 529 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 COMMD2Q86X83 199 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 OR2AE1Q8NHA4 323 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 SNTG1Q9NSN8 517 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 PTTG3PQ9NZH4 202 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 POU2F3Q9UKI9 436 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 FOXJ3Q9UPW0 622 aa12.84□□□□□ -0.35
NFIX-208ENST00000587260 hCG_38984A0A1B0GV85 526 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 A0A1W2PPK0 400 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 CDRT1O95170 752 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 ZNF182P17025 639 aaPredicted RBP12.83□□□□□ -0.35
NFIX-208ENST00000587260 IGFBP3P17936 291 aaPredicted RBP12.83□□□□□ -0.35
NFIX-208ENST00000587260 MYL9P24844 172 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 RAD52P43351 418 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 FAM3AP98173 230 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 ASPHD2Q6ICH7 369 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 ZNF529Q6P280 563 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 SERPINA12Q8IW75 414 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 ACBD4Q8NC06 268 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 OR1J1Q8NGS3 322 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 FAM71F1Q96KD3 344 aaPredicted RBP12.83□□□□□ -0.35
NFIX-208ENST00000587260 BCL2L14Q9BZR8 327 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 ZCCHC4Q9H5U6 513 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 PTTG2Q9NZH5 202 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 RNF115Q9Y4L5 304 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 ATP23Q9Y6H3 246 aa12.83□□□□□ -0.35
NFIX-208ENST00000587260 ALX3O95076 343 aa12.83□□□□□ -0.36
NFIX-208ENST00000587260 PLAUP00749 431 aa12.83□□□□□ -0.36
NFIX-208ENST00000587260 COL8A1P27658 744 aa12.83□□□□□ -0.36
NFIX-208ENST00000587260 DDOSTP39656 456 aa12.83□□□□□ -0.36
NFIX-208ENST00000587260 MAP2K3P46734 347 aa12.83□□□□□ -0.36
NFIX-208ENST00000587260 PPP1CBP62140 327 aa12.83□□□□□ -0.36
NFIX-208ENST00000587260 TNK1Q13470 666 aa12.83□□□□□ -0.36
NFIX-208ENST00000587260 GK2Q14410 553 aaPredicted RBP12.83□□□□□ -0.36
NFIX-208ENST00000587260 ZBTB37Q5TC79 503 aa12.83□□□□□ -0.36
NFIX-208ENST00000587260 FBXW12Q6X9E4 464 aa12.83□□□□□ -0.36
NFIX-208ENST00000587260 NEUROG1Q92886 237 aa12.83□□□□□ -0.36
NFIX-208ENST00000587260 SLC25A46Q96AG3 418 aa12.83□□□□□ -0.36
NFIX-208ENST00000587260 FGGYQ96C11 551 aa12.83□□□□□ -0.36
NFIX-208ENST00000587260 ADAT3Q96EY9 351 aaPredicted RBP12.83□□□□□ -0.36
NFIX-208ENST00000587260 CCDC59Q9P031 241 aaKnown RBP12.83□□□□□ -0.36
NFIX-208ENST00000587260 FZR1Q9UM11 496 aa12.83□□□□□ -0.36
NFIX-208ENST00000587260 TRAV8-7A0A075B6U6 113 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 LMX1BO60663 402 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 CD37P11049 281 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 COX6B1P14854 86 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 LOXP28300 417 aaPredicted RBP12.82□□□□□ -0.36
NFIX-208ENST00000587260 GSK3AP49840 483 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 RIPPLY1Q0D2K3 151 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 HLXQ14774 488 aaPredicted RBP12.82□□□□□ -0.36
NFIX-208ENST00000587260 CEP78Q5JTW2 689 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 LRRTM1Q86UE6 522 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 SEMA6DQ8NFY4 1073 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 OR5D14Q8NGL3 314 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 SLC25A40Q8TBP6 338 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 PP6455Q8WZ26 134 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 ORAI1Q96D31 301 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 SPOCK3Q9BQ16 436 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 DCUN1D5Q9BTE7 237 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 OR2J1Q9GZK6 312 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 SLITRK2Q9H156 845 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 TCF7L1Q9HCS4 588 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 CKLFQ9UBR5 152 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 SPEF1Q9Y4P9 236 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 CADP27708 2225 aa12.82□□□□□ -0.36
NFIX-208ENST00000587260 A6NNC1 897 aa12.81□□□□□ -0.36
NFIX-208ENST00000587260 SHISA9B4DS77 424 aa12.81□□□□□ -0.36
NFIX-208ENST00000587260 PDCD5O14737 125 aa12.81□□□□□ -0.36
NFIX-208ENST00000587260 CLEC2LP0C7M8 214 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms