RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 TNFSF8P32971 234 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 NR4A2P43354 598 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 PPP3R1P63098 170 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 MRPS11P82912 194 aaKnown RBP10.62□□□□□ -0.71
ERCC2-207ENST00000586441 MXD1Q05195 221 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 TBC1D28Q2M2D7 210 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 TMEM249Q2WGJ8 235 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 TRIM16LQ309B1 348 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 DNM1P34Q6PK57 102 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 DCDC5Q6ZRR9 648 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 PARP16Q8N5Y8 322 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 OR51L1Q8NGJ5 315 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 ABHD4Q8TB40 342 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 NABP1Q96AH0 204 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 PPP1R14BQ96C90 147 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 PIMREGQ9BSJ6 248 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 MROQ9BYG7 248 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 TPK1Q9H3S4 243 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 RERGLQ9H628 205 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 MARCH7Q9H992 704 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 SRA1Q9HD15 236 aaKnown RBP10.62□□□□□ -0.71
ERCC2-207ENST00000586441 TUBG2Q9NRH3 451 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 VSX1Q9NZR4 365 aaPredicted RBP10.62□□□□□ -0.71
ERCC2-207ENST00000586441 DAPK2Q9UIK4 370 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 ADAM30Q9UKF2 790 aa10.62□□□□□ -0.71
ERCC2-207ENST00000586441 IGLV3-9A0A075B6K5 115 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 CTDSP2O14595 271 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 SELENOFO60613 162 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 ARL6IP5O75915 188 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 PATE4P0C8F1 98 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 OCM2P0CE71 109 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 OCMP0CE72 109 aaPredicted RBP10.61□□□□□ -0.71
ERCC2-207ENST00000586441 COX5BP10606 129 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 GZMKP49863 264 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 UCP2P55851 309 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 SLC3A1Q07837 685 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 CDK5R1Q15078 307 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 TP53I3Q53FA7 332 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 TMEM91Q6ZNR0 172 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 TIGD4Q8IY51 512 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 CENPSQ8N2Z9 138 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 C11orf40Q8WZ69 217 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 HTRA1Q92743 480 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 KCTD12Q96CX2 325 aaKnown RBP10.61□□□□□ -0.71
ERCC2-207ENST00000586441 SMIM19Q96E16 107 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 INTS14Q96SY0 518 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 MRPL37Q9BZE1 423 aaKnown RBP10.61□□□□□ -0.71
ERCC2-207ENST00000586441 WDR76Q9H967 626 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 CDH20Q9HBT6 801 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 DYNLRB1Q9NP97 96 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 SLCO1C1Q9NYB5 712 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 NKIRAS2Q9NYR9 191 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 GNG8Q9UK08 70 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 TIMM10BQ9Y5J6 103 aa10.61□□□□□ -0.71
ERCC2-207ENST00000586441 SIRT4Q9Y6E7 314 aaPredicted RBP10.61□□□□□ -0.71
ERCC2-207ENST00000586441 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.6□□□□□ -0.713e-9■■■□□ 16.3
ERCC2-207ENST00000586441 TRAV1-2A0A0B4J238 106 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 TRBV2A0A0J9YWF9 115 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 A8MV72 311 aaPredicted RBP10.6□□□□□ -0.71
ERCC2-207ENST00000586441 INAFM1C9JVW0 142 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 E9PI62 339 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 KRT8P05787 483 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 DAOP14920 347 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 PTBP1P26599 531 aaKnown RBP eCLIP10.6□□□□□ -0.71
ERCC2-207ENST00000586441 STOMP27105 288 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 APLNRP35414 380 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 GDI2P50395 445 aaKnown RBP10.6□□□□□ -0.71
ERCC2-207ENST00000586441 DEFA1P59665 94 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 DEFA3P59666 94 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 EGR3Q06889 387 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 SGCAQ16586 387 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 PABPC1L2AQ5JQF8 200 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 FAM209AQ5JX71 171 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 CYB5R2Q6BCY4 276 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 RGS7BPQ6MZT1 257 aaPredicted RBP10.6□□□□□ -0.71
ERCC2-207ENST00000586441 METAP1DQ6UB28 335 aaPredicted RBP10.6□□□□□ -0.71
ERCC2-207ENST00000586441 SSX6Q7RTT6 188 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 CEACAM19Q7Z692 300 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 OR6V1Q8N148 313 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 LRRC18Q8N456 261 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 MAPK1IP1LQ8NDC0 245 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 CPEB3Q8NE35 698 aaKnown RBP10.6□□□□□ -0.71
ERCC2-207ENST00000586441 UBASH3BQ8TF42 649 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 ASB17Q8WXJ9 295 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 GHSRQ92847 366 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 HPS1Q92902 700 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 PELI1Q96FA3 418 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 POM121L2Q96KW2 1035 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 PGLYRP3Q96LB9 341 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 FOXN4Q96NZ1 517 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 EIF3KQ9UBQ5 218 aaKnown RBP10.6□□□□□ -0.71
ERCC2-207ENST00000586441 LAMP5Q9UJQ1 280 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 COPS3Q9UNS2 423 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 B9D1Q9UPM9 204 aa10.6□□□□□ -0.71
ERCC2-207ENST00000586441 IGKV1D-43A0A0B4J1Z2 117 aa10.59□□□□□ -0.71
ERCC2-207ENST00000586441 PFDN1O60925 122 aa10.59□□□□□ -0.71
ERCC2-207ENST00000586441 TMEM127O75204 238 aa10.59□□□□□ -0.71
ERCC2-207ENST00000586441 SC5DO75845 299 aa10.59□□□□□ -0.71
ERCC2-207ENST00000586441 CLEC2LP0C7M8 214 aa10.59□□□□□ -0.71
ERCC2-207ENST00000586441 ZNF32P17041 273 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms