RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 FABP7O15540 132 aa9.04□□□□□ -0.96
RFFL-212ENST00000584655 DHFRP00374 187 aa9.04□□□□□ -0.96
RFFL-212ENST00000584655 H2AFB2P0C5Z0 115 aa9.04□□□□□ -0.96
RFFL-212ENST00000584655 CD46P15529 392 aa9.04□□□□□ -0.96
RFFL-212ENST00000584655 ERVS71-1P61550 626 aa9.04□□□□□ -0.96
RFFL-212ENST00000584655 ASCL5Q7RTU5 278 aa9.04□□□□□ -0.96
RFFL-212ENST00000584655 C6orf201Q7Z4U5 140 aa9.04□□□□□ -0.96
RFFL-212ENST00000584655 SKA3Q8IX90 412 aa9.04□□□□□ -0.96
RFFL-212ENST00000584655 OR2T35Q8NGX2 323 aa9.04□□□□□ -0.96
RFFL-212ENST00000584655 YIPF5Q969M3 257 aa9.04□□□□□ -0.96
RFFL-212ENST00000584655 NARS2Q96I59 477 aaKnown RBP9.04□□□□□ -0.96
RFFL-212ENST00000584655 FOXB1Q99853 325 aa9.04□□□□□ -0.96
RFFL-212ENST00000584655 ACTR6Q9GZN1 396 aa9.04□□□□□ -0.96
RFFL-212ENST00000584655 RBFOX1Q9NWB1 397 aaKnown RBP9.04□□□□□ -0.96
RFFL-212ENST00000584655 MRPS28Q9Y2Q9 187 aaKnown RBP9.04□□□□□ -0.96
RFFL-212ENST00000584655 A6NLC8 198 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 RAB3AP20336 220 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 BLVRBP30043 206 aaPredicted RBP9.03□□□□□ -0.96
RFFL-212ENST00000584655 SLC25A1P53007 311 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 RAC1P63000 192 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 SLC9A3R2Q15599 337 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 PLCXD3Q63HM9 321 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 PYHIN1Q6K0P9 492 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 GTPBP8Q8N3Z3 284 aaPredicted RBP9.03□□□□□ -0.96
RFFL-212ENST00000584655 BPIFB2Q8N4F0 458 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 ST7LQ8TDW4 575 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 OR2M2Q96R28 347 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 WDR54Q9H977 334 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 CUBNO60494 3623 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 TNFSF12O43508 249 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 SLC19A2O60779 497 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 GRPP07492 148 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 MAPK3P27361 379 aaPredicted RBP9.03□□□□□ -0.96
RFFL-212ENST00000584655 BDKRB2P30411 391 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 PTGER4P35408 488 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 MAP2K6P52564 334 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 TRA2AQ13595 282 aaKnown RBP eCLIP9.03□□□□□ -0.96
RFFL-212ENST00000584655 CDK10Q15131 360 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 THEM4Q5T1C6 240 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 TRAPPC6BQ86SZ2 158 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 BIVMQ86UB2 503 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 CDC6Q99741 560 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 BCL2L14Q9BZR8 327 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 NOX3Q9HBY0 568 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 PTTG3PQ9NZH4 202 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 OR14J1Q9UGF5 321 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 ABCA2Q9BZC7 2435 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 AQP7P3A6NL99 342 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 ZNF850A8MQ14 1090 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 GPR171O14626 319 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 EFSO43281 561 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 CRYZL1O95825 349 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 CYB5AP00167 134 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 CELA3BP08861 270 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 RAB14P61106 215 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 TNK1Q13470 666 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 OR2T2Q6IF00 324 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 CD200R1LQ6Q8B3 271 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 EXD3Q8N9H8 876 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 OR5D14Q8NGL3 314 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 IL1F10Q8WWZ1 152 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 CCDC32Q9BV29 185 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 CLEC4MQ9H2X3 399 aaPredicted RBP9.03□□□□□ -0.96
RFFL-212ENST00000584655 HAO2Q9NYQ3 351 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 MGAT4CQ9UBM8 478 aa9.03□□□□□ -0.96
RFFL-212ENST00000584655 hCG_1807616A0A1W2PRN6 198 aa9.02□□□□□ -0.96
RFFL-212ENST00000584655 GGT3PA6NGU5 568 aa9.02□□□□□ -0.96
RFFL-212ENST00000584655 TRIM64BA6NI03 449 aa9.02□□□□□ -0.96
RFFL-212ENST00000584655 HS3ST1O14792 307 aa9.02□□□□□ -0.96
RFFL-212ENST00000584655 FARS2O95363 451 aaKnown RBP9.02□□□□□ -0.96
RFFL-212ENST00000584655 ASPHD2Q6ICH7 369 aa9.02□□□□□ -0.96
RFFL-212ENST00000584655 BPHLQ86WA6 291 aaPredicted RBP9.02□□□□□ -0.96
RFFL-212ENST00000584655 ZNF431Q8TF32 576 aaPredicted RBP9.02□□□□□ -0.96
RFFL-212ENST00000584655 CCDC107Q8WV48 283 aa9.02□□□□□ -0.96
RFFL-212ENST00000584655 ANGPTL4Q9BY76 406 aa9.02□□□□□ -0.96
RFFL-212ENST00000584655 IL36RNQ9UBH0 155 aa9.02□□□□□ -0.96
RFFL-212ENST00000584655 STEAP1Q9UHE8 339 aa9.02□□□□□ -0.96
RFFL-212ENST00000584655 MCTS1Q9ULC4 181 aaKnown RBP9.02□□□□□ -0.96
RFFL-212ENST00000584655 FLVCR1Q9Y5Y0 555 aa9.02□□□□□ -0.96
RFFL-212ENST00000584655 MED12LQ86YW9 2145 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 CSMD1Q96PZ7 3565 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 PYCARD-AS1I3L0S3 204 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 ZNF208O43345 1280 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 GPRIN2O60269 458 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 RAB3DO95716 219 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 HLA-DQB1P01920 261 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 BMP5P22003 454 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 MSX1P28360 303 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 RAB1AP62820 205 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 CISD2Q8N5K1 135 aaKnown RBP9.02□□□□□ -0.97
RFFL-212ENST00000584655 SUMF1Q8NBK3 374 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 OR4C16Q8NGL9 310 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 RDH5Q92781 318 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 FBXW5Q969U6 566 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 IER2Q9BTL4 223 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 CYB5R1Q9UHQ9 305 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 NOP16Q9Y3C1 178 aaKnown RBP9.02□□□□□ -0.97
RFFL-212ENST00000584655 ETV6P41212 452 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 SCRN3Q0VDG4 424 aa9.02□□□□□ -0.97
RFFL-212ENST00000584655 IDO2Q6ZQW0 420 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms