RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 FBP1P09467 338 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 PCMT1P22061 227 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 BTG2P78543 158 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 SHHQ15465 462 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 FBXO46Q6PJ61 603 aaPredicted RBP11.79□□□□□ -0.52
RNF43-208ENST00000584437 DGAT2L6Q6ZPD8 337 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 MRGPRX4Q96LA9 322 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 CCDC74BQ96LY2 380 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 NDFIP1Q9BT67 221 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 TRAPPC1Q9Y5R8 145 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 OR2J2O76002 312 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 RPS23P62266 143 aaKnown RBP11.79□□□□□ -0.52
RNF43-208ENST00000584437 ERHP84090 104 aaKnown RBP11.79□□□□□ -0.52
RNF43-208ENST00000584437 FZD2Q14332 565 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 SSX1Q16384 188 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 MRM1Q6IN84 353 aaKnown RBP11.79□□□□□ -0.52
RNF43-208ENST00000584437 STPG2Q8N412 459 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 S1PR3Q99500 378 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 LANCL2Q9NS86 450 aa11.79□□□□□ -0.52
RNF43-208ENST00000584437 EXOGQ9Y2C4 368 aaKnown RBP11.79□□□□□ -0.52
RNF43-208ENST00000584437 CNIH1O95406 144 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 PGA3P0DJD8 388 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 HNF1AP20823 631 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 RPS27P42677 84 aaKnown RBP11.78□□□□□ -0.52
RNF43-208ENST00000584437 NKAIN1Q4KMZ8 207 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 TOMM20LQ6UXN7 152 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 VN1R2Q8NFZ6 395 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 OTOSQ8NHW6 89 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 BOD1Q96IK1 185 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 PLEKHB1Q9UF11 243 aaPredicted RBP11.78□□□□□ -0.52
RNF43-208ENST00000584437 ST3GAL6Q9Y274 331 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 CHD4Q14839 1912 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 DBX1A6NMT0 343 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 TBX19O60806 448 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 GGNBP1Q5YKI7 109 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 KIRREL2Q6UWL6 708 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 MVB12AQ96EY5 273 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 CNRIP1Q96F85 164 aaPredicted RBP11.78□□□□□ -0.52
RNF43-208ENST00000584437 ST6GAL2Q96JF0 529 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 AQP7P3A6NL99 342 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 ICOSLGO75144 302 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 LY86O95711 162 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 G0S2P27469 103 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 CNN1P51911 297 aaKnown RBP11.78□□□□□ -0.52
RNF43-208ENST00000584437 HMGA2P52926 109 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 MLF1P58340 268 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 TIPARPQ7Z3E1 657 aaKnown RBP11.78□□□□□ -0.52
RNF43-208ENST00000584437 TSEN54Q7Z6J9 526 aaKnown RBP11.78□□□□□ -0.52
RNF43-208ENST00000584437 ABI3BPQ7Z7G0 1075 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 MUC20Q8N307 709 aaPredicted RBP11.78□□□□□ -0.52
RNF43-208ENST00000584437 EDARADDQ8WWZ3 215 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 ORAI1Q96D31 301 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 FBXO4Q9UKT5 387 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 TERTO14746 1132 aaKnown RBP11.78□□□□□ -0.52
RNF43-208ENST00000584437 OR5G3P0C626 314 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 ZNF17P17021 662 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 CSNK1EP49674 416 aaKnown RBP11.78□□□□□ -0.52
RNF43-208ENST00000584437 SUMO3P55854 103 aaPredicted RBP11.78□□□□□ -0.52
RNF43-208ENST00000584437 LGALS4P56470 323 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 DHRS2Q13268 280 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 TMEM183BQ1AE95 376 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 CD300LDQ6UXZ3 194 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 OR52N4Q8NGI2 321 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 ERGIC1Q969X5 290 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 EGLN1Q9GZT9 426 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 URB1O60287 2271 aaKnown RBP11.78□□□□□ -0.52
RNF43-208ENST00000584437 TOPAZ1Q8N9V7 1692 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 MBTPS2O43462 519 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 SFT2D2O95562 160 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 EMDP50402 254 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 PMP22Q01453 160 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 CDONQ4KMG0 1287 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 NKAIN2Q5VXU1 208 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 TCTEX1D1Q8N7M0 179 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 SCCPDHQ8NBX0 429 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 ZNF426Q9BUY5 554 aa11.78□□□□□ -0.52
RNF43-208ENST00000584437 FAM221AA4D161 298 aa11.77□□□□□ -0.52
RNF43-208ENST00000584437 ANKUB1A6NFN9 424 aa11.77□□□□□ -0.52
RNF43-208ENST00000584437 FRG2CA6NGY1 282 aa11.77□□□□□ -0.52
RNF43-208ENST00000584437 SULT1A3P0DMM9 295 aa11.77□□□□□ -0.52
RNF43-208ENST00000584437 SULT1A4P0DMN0 295 aa11.77□□□□□ -0.52
RNF43-208ENST00000584437 ABCD3P28288 659 aa11.77□□□□□ -0.52
RNF43-208ENST00000584437 RPL13AP40429 203 aaKnown RBP11.77□□□□□ -0.52
RNF43-208ENST00000584437 CLEC12BQ2HXU8 276 aa11.77□□□□□ -0.52
RNF43-208ENST00000584437 ZDHHC23Q8IYP9 409 aa11.77□□□□□ -0.52
RNF43-208ENST00000584437 CRYM-AS1A6NIL9 109 aa11.77□□□□□ -0.53
RNF43-208ENST00000584437 FUT6P51993 359 aa11.77□□□□□ -0.53
RNF43-208ENST00000584437 ZNF77Q15935 545 aa11.77□□□□□ -0.53
RNF43-208ENST00000584437 ELOA3CA0A087WX78 387 aaPredicted RBP11.77□□□□□ -0.53
RNF43-208ENST00000584437 A0A0A6YYD5 115 aa11.77□□□□□ -0.53
RNF43-208ENST00000584437 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.77□□□□□ -0.53
RNF43-208ENST00000584437 SIRPB1O00241 398 aa11.77□□□□□ -0.53
RNF43-208ENST00000584437 ZNF121P58317 390 aaPredicted RBP11.77□□□□□ -0.53
RNF43-208ENST00000584437 COTL1Q14019 142 aa11.77□□□□□ -0.53
RNF43-208ENST00000584437 TMEM104Q8NE00 496 aa11.77□□□□□ -0.53
RNF43-208ENST00000584437 OR10G3Q8NGC4 313 aa11.77□□□□□ -0.53
RNF43-208ENST00000584437 AP4M1O00189 453 aa11.77□□□□□ -0.53
RNF43-208ENST00000584437 USF1P22415 310 aaPredicted RBP11.77□□□□□ -0.53
RNF43-208ENST00000584437 FXNQ16595 210 aa11.77□□□□□ -0.53
RNF43-208ENST00000584437 COMMD5Q9GZQ3 224 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms