RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 TRIM36Q9NQ86 728 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 CENPMQ9NSP4 180 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 ARMC1Q9NVT9 282 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 VNN3Q9NY84 501 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 CLN8Q9UBY8 286 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 DNAH7Q8WXX0 4024 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 IGHV2-70DA0A0C4DH43 119 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 ARRDC5A6NEK1 342 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 H3BN98 237 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 PHYHO14832 338 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 PTBP3O95758 552 aaKnown RBP9.27□□□□□ -0.93
CCDC47-206ENST00000584112 CST1P01037 141 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 HSD11B1P28845 292 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 GRK5P34947 590 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 PMELP40967 661 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 NPY4RP50391 375 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 PRKXP51817 358 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 PAX2Q02962 417 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 FAM201AQ5SY85 155 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 GLYATL3Q5SZD4 288 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 SAMD5Q5TGI4 173 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 PRAMEF6Q5VXH4 476 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 DOK3Q7L591 496 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 SIGLECL1Q8N7X8 197 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 OR2AE1Q8NHA4 323 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 GIPC3Q8TF64 312 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 RAB40AQ8WXH6 277 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 CCDC124Q96CT7 223 aaKnown RBP9.27□□□□□ -0.93
CCDC47-206ENST00000584112 INTS14Q96SY0 518 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 MS4A7Q9GZW8 240 aaPredicted RBP9.27□□□□□ -0.93
CCDC47-206ENST00000584112 CMC2Q9NRP2 79 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 UFSP2Q9NUQ7 469 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 C14orf119Q9NWQ9 140 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 RNF7Q9UBF6 113 aa9.27□□□□□ -0.93
CCDC47-206ENST00000584112 LCE6AA0A183 80 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 DHRS12A0PJE2 317 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 SLC22A31A6NKX4 558 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 AQP12BA6NM10 295 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 GNGT2O14610 69 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 TIMM23O14925 209 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 NDUFA2O43678 99 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 ANXA2P07355 339 aaKnown RBP9.26□□□□□ -0.93
CCDC47-206ENST00000584112 T-ENOLP0DO92 83 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 CLUP10909 449 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 PSKH1P11801 424 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 SNRPBP14678 240 aaKnown RBP9.26□□□□□ -0.93
CCDC47-206ENST00000584112 PAICSP22234 425 aaKnown RBP9.26□□□□□ -0.93
CCDC47-206ENST00000584112 CD80P33681 288 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 DDOSTP39656 456 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 MTNR1AP48039 350 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 EIF2B1Q14232 305 aaKnown RBP9.26□□□□□ -0.93
CCDC47-206ENST00000584112 MPPED2Q15777 294 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 TIGD6Q17RP2 521 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 TUSC1Q2TAM9 212 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 KLF17Q5JT82 389 aaPredicted RBP9.26□□□□□ -0.93
CCDC47-206ENST00000584112 C17orf107Q6ZR85 190 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 SHFQ7M4L6 423 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 AQP12AQ8IXF9 295 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 PARP8Q8N3A8 854 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 KIR3DL3Q8N743 410 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 OR56B2PQ8NGI1 322 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 OR6N2Q8NGY6 317 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 OTULINQ96BN8 352 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 UPRTQ96BW1 309 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 FEVQ99581 238 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 NIPSNAP1Q9BPW8 284 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 NUDT16L1Q9BRJ7 211 aaKnown RBP9.26□□□□□ -0.93
CCDC47-206ENST00000584112 THTPAQ9BU02 230 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 ZNF556Q9HAH1 456 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 AURKAIP1Q9NWT8 199 aaPredicted RBP9.26□□□□□ -0.93
CCDC47-206ENST00000584112 TAS2R1Q9NYW7 299 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 ZNF69Q9UC07 566 aa9.26□□□□□ -0.93
CCDC47-206ENST00000584112 TRAV38-1A0A0B4J264 116 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 KIR2DS1A0A191URI9 304 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 DNAJC9-AS1A6NH13 148 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 ANKRD30BLA7E2S9 258 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 LGALS8O00214 317 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 TBX1O43435 398 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 ENSAO43768 121 aaKnown RBP9.25□□□□□ -0.93
CCDC47-206ENST00000584112 GLCEO94923 617 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 SLC2A1P11166 492 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 CFL1P23528 166 aaKnown RBP9.25□□□□□ -0.93
CCDC47-206ENST00000584112 PRTN3P24158 256 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 GSTT1P30711 240 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 PSMB10P40306 273 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 CX3CR1P49238 355 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 BAMBIQ13145 260 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 OR8B8Q15620 311 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 SNCBQ16143 134 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 LINC01590Q5TEZ4 76 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 CD276Q5ZPR3 534 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 WDR25Q64LD2 544 aaPredicted RBP9.25□□□□□ -0.93
CCDC47-206ENST00000584112 C9orf139Q6ZV77 190 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 SPATC1Q76KD6 591 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 DPY19L4Q7Z388 723 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 ERI1Q8IV48 349 aaKnown RBP9.25□□□□□ -0.93
CCDC47-206ENST00000584112 OR52H1Q8NGJ2 320 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 OR8S1Q8NH09 359 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 RNF133Q8WVZ7 376 aa9.25□□□□□ -0.93
CCDC47-206ENST00000584112 SPSB4Q96A44 273 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms