RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 NUP50Q9UKX7 468 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 M0R135 149 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 MPZL2O60487 215 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 CYB5R3P00387 301 aaPredicted RBP17.52■□□□□ 0.4
CCDC42-203ENST00000581598 LCATP04180 440 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 PPIAL4GP0DN37 164 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 ZNF3P17036 446 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 PAX2Q02962 417 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 PAX8Q06710 450 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 ZNF404Q494X3 552 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 ARMCX4Q5H9R4 360 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 SLC25A30Q5SVS4 291 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 NAA40Q86UY6 237 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 MOGAT3Q86VF5 341 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 TCEANCQ8N8B7 351 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 SLC37A3Q8NCC5 494 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 OR10S1Q8NGN2 331 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 UBE2FQ969M7 185 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 ZNF799Q96GE5 643 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 PLEKHA8Q96JA3 519 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 SSBP3Q9BWW4 388 aaPredicted RBP17.52■□□□□ 0.4
CCDC42-203ENST00000581598 SLC22A4Q9H015 551 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 ESM1Q9NQ30 184 aa17.52■□□□□ 0.4
CCDC42-203ENST00000581598 NOP16Q9Y3C1 178 aaKnown RBP17.52■□□□□ 0.4
CCDC42-203ENST00000581598 PYCR1P32322 319 aa17.51■□□□□ 0.39
CCDC42-203ENST00000581598 PMELP40967 661 aa17.51■□□□□ 0.39
CCDC42-203ENST00000581598 MAB21L1Q13394 359 aa17.51■□□□□ 0.39
CCDC42-203ENST00000581598 CRMP1Q14194 572 aa17.51■□□□□ 0.39
CCDC42-203ENST00000581598 PCK2Q16822 640 aa17.51■□□□□ 0.39
CCDC42-203ENST00000581598 KLF17Q5JT82 389 aaPredicted RBP17.51■□□□□ 0.39
CCDC42-203ENST00000581598 PGAP1Q75T13 922 aa17.51■□□□□ 0.39
CCDC42-203ENST00000581598 THAP5Q7Z6K1 395 aa17.51■□□□□ 0.39
CCDC42-203ENST00000581598 KLBQ86Z14 1044 aa17.51■□□□□ 0.39
CCDC42-203ENST00000581598 CYB561A3Q8NBI2 242 aa17.51■□□□□ 0.39
CCDC42-203ENST00000581598 PROKR2Q8NFJ6 384 aa17.51■□□□□ 0.39
CCDC42-203ENST00000581598 GCDHQ92947 438 aaPredicted RBP17.51■□□□□ 0.39
CCDC42-203ENST00000581598 DACT3Q96B18 629 aaPredicted RBP17.51■□□□□ 0.39
CCDC42-203ENST00000581598 TMEM246Q9BRR3 403 aa17.51■□□□□ 0.39
CCDC42-203ENST00000581598 NMNAT2Q9BZQ4 307 aa17.51■□□□□ 0.39
CCDC42-203ENST00000581598 HLA-DPB1P04440 258 aa17.5■□□□□ 0.39
CCDC42-203ENST00000581598 RPS2P15880 293 aaKnown RBP17.5■□□□□ 0.39
CCDC42-203ENST00000581598 SLC25A1P53007 311 aa17.5■□□□□ 0.39
CCDC42-203ENST00000581598 UBA52P62987 128 aaKnown RBP17.5■□□□□ 0.39
CCDC42-203ENST00000581598 IL5RAQ01344 420 aa17.5■□□□□ 0.39
CCDC42-203ENST00000581598 TEX30Q5JUR7 227 aa17.5■□□□□ 0.39
CCDC42-203ENST00000581598 DRAM2Q6UX65 266 aa17.5■□□□□ 0.39
CCDC42-203ENST00000581598 LRRN1Q6UXK5 716 aa17.5■□□□□ 0.39
CCDC42-203ENST00000581598 DOK3Q7L591 496 aa17.5■□□□□ 0.39
CCDC42-203ENST00000581598 MRPL21Q7Z2W9 205 aaKnown RBP17.5■□□□□ 0.39
CCDC42-203ENST00000581598 APH1BQ8WW43 257 aa17.5■□□□□ 0.39
CCDC42-203ENST00000581598 ZNRF4Q8WWF5 429 aa17.5■□□□□ 0.39
CCDC42-203ENST00000581598 NEIL1Q96FI4 390 aaPredicted RBP17.5■□□□□ 0.39
CCDC42-203ENST00000581598 IL4I1Q96RQ9 567 aa17.5■□□□□ 0.39
CCDC42-203ENST00000581598 PPIAL4AQ9Y536 164 aa17.5■□□□□ 0.39
CCDC42-203ENST00000581598 COMMD3-BMI1R4GMX3 469 aa17.5■□□□□ 0.39
CCDC42-203ENST00000581598 TENM1Q9UKZ4 2725 aa17.5■□□□□ 0.39
CCDC42-203ENST00000581598 PTBP3O95758 552 aaKnown RBP17.49■□□□□ 0.39
CCDC42-203ENST00000581598 IRF2P14316 349 aa17.49■□□□□ 0.39
CCDC42-203ENST00000581598 OCLNQ16625 522 aa17.49■□□□□ 0.39
CCDC42-203ENST00000581598 AADACL4Q5VUY2 407 aa17.49■□□□□ 0.39
CCDC42-203ENST00000581598 SPRYD4Q8WW59 207 aaPredicted RBP17.49■□□□□ 0.39
CCDC42-203ENST00000581598 C22orf15Q8WYQ4 148 aa17.49■□□□□ 0.39
CCDC42-203ENST00000581598 CNBD2Q96M20 576 aa17.49■□□□□ 0.39
CCDC42-203ENST00000581598 ZMAT3Q9HA38 289 aaKnown RBP17.49■□□□□ 0.39
CCDC42-203ENST00000581598 ZNF69Q9UC07 566 aa17.49■□□□□ 0.39
CCDC42-203ENST00000581598 TVP23AA6NH52 213 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 CD300LBA8K4G0 201 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 PRR23D1E9PI22 279 aaPredicted RBP17.48■□□□□ 0.39
CCDC42-203ENST00000581598 WBP4O75554 376 aaKnown RBP17.48■□□□□ 0.39
CCDC42-203ENST00000581598 PRR23D2P0DMB1 279 aaPredicted RBP17.48■□□□□ 0.39
CCDC42-203ENST00000581598 PAICSP22234 425 aaKnown RBP17.48■□□□□ 0.39
CCDC42-203ENST00000581598 CD80P33681 288 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 PRSS12P56730 875 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 GNB2P62879 340 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 NXNL2Q5VZ03 156 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 LAIR2Q6ISS4 152 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 BTNL3Q6UXE8 466 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 RBMS3Q6XE24 437 aaKnown RBP17.48■□□□□ 0.39
CCDC42-203ENST00000581598 DCDC5Q6ZRR9 648 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 NLRC3Q7RTR2 1065 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 CPOQ8IVL8 374 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 PLPP7Q8NBV4 271 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 OR8B3Q8NGG8 313 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 OR11L1Q8NGX0 322 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 RAB40AQ8WXH6 277 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 ZMYND19Q96E35 227 aaPredicted RBP17.48■□□□□ 0.39
CCDC42-203ENST00000581598 OR8B2Q96RD0 313 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 OPA3Q9H6K4 179 aa17.48■□□□□ 0.39
CCDC42-203ENST00000581598 IGHV2-70DA0A0C4DH43 119 aa17.47■□□□□ 0.39
CCDC42-203ENST00000581598 FAM183AA6NL82 134 aa17.47■□□□□ 0.39
CCDC42-203ENST00000581598 GMDSO60547 372 aa17.47■□□□□ 0.39
CCDC42-203ENST00000581598 ZNF205O95201 554 aa17.47■□□□□ 0.39
CCDC42-203ENST00000581598 PSKH1P11801 424 aa17.47■□□□□ 0.39
CCDC42-203ENST00000581598 SLC2A5P22732 501 aa17.47■□□□□ 0.39
CCDC42-203ENST00000581598 FMO3P31513 532 aa17.47■□□□□ 0.39
CCDC42-203ENST00000581598 RPS27P42677 84 aaKnown RBP17.47■□□□□ 0.39
CCDC42-203ENST00000581598 ENTPD1P49961 510 aa17.47■□□□□ 0.39
CCDC42-203ENST00000581598 BLVRAP53004 296 aa17.47■□□□□ 0.39
CCDC42-203ENST00000581598 ZNF92Q03936 586 aa17.47■□□□□ 0.39
CCDC42-203ENST00000581598 MED21Q13503 144 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms