RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 TMPPEQ6ZT21 453 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 C1QL2Q7Z5L3 287 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 PPP1R3BQ86XI6 285 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF283Q8N7M2 679 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 NOXO1Q8NFA2 376 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 OR2M3Q8NG83 312 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 CCDC107Q8WV48 283 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 PPP1R1CQ8WVI7 109 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 TMPRSS13Q9BYE2 586 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 SLC6A15Q9H2J7 730 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 MYO7BQ6PIF6 2116 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 LOC390937A0A1W2PQ73 354 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 RAD51DO75771 328 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 HTR3BO95264 441 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 RNF224P0DH78 156 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 CCL4P13236 92 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 EPHA8P29322 1005 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-209ENST00000580095 CX3CR1P49238 355 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 LUMP51884 338 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-209ENST00000580095 STARD6P59095 220 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 GMFBP60983 142 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 IL13RA1P78552 427 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 QRFPP83859 136 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 TOMM20Q15388 145 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 HLA-BQ31612 363 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 PHYHD1Q5SRE7 291 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 C5orf46Q6UWT4 87 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 OR5L2Q8NGL0 311 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 SPACA9Q96E40 222 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF837Q96EG3 531 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-209ENST00000580095 MRGPRX4Q96LA9 322 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 CHRDQ9H2X0 955 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 UPB1Q9UBR1 384 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 GPR160Q9UJ42 338 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 MRPS28Q9Y2Q9 187 aaKnown RBP9.26□□□□□ -0.93
TOP3A-209ENST00000580095 MFSD2BA6NFX1 497 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF726A6NNF4 738 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 HMSDA8MTL9 139 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 STMND1H3BQB6 276 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 SDCBPO00560 298 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-209ENST00000580095 ZNHIT1O43257 154 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 CRTAPO75718 401 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-209ENST00000580095 F10P00742 488 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 DBHP09172 617 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 C4BPBP20851 252 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 THEM4Q5T1C6 240 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 OR5AS1Q8N127 324 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 CARFQ8N187 725 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 NKAIN3Q8N8D7 197 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF385AQ96PM9 386 aaKnown RBP9.26□□□□□ -0.93
TOP3A-209ENST00000580095 SLC25A21Q9BQT8 299 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-209ENST00000580095 LOC400499M0QZD8 3231 aa9.26□□□□□ -0.93
TOP3A-209ENST00000580095 TRBV23-1A0A0A0MS06 115 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 A0A1B0GWJ7 208 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 OR5H15A6NDH6 313 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 TTLL8A6PVC2 850 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF878C9JN71 531 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 CLN5O75503 358 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 PDGFBP01127 241 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-209ENST00000580095 CD74P04233 296 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 IFNA6P05013 189 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 CCL3P10147 92 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 IKZF1Q13422 519 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 CCDC157Q569K6 752 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 RAET1LQ5VY80 246 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 LYSMD4Q5XG99 296 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF385CQ66K41 422 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-209ENST00000580095 ELP2Q6IA86 826 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 UNQ6126/PRO20091Q6UXV3 157 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.25□□□□□ -0.93
TOP3A-209ENST00000580095 BHLHE23Q8NDY6 225 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 SCARB1Q8WTV0 552 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 ST6GALNAC5Q9BVH7 336 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 SHARPINQ9H0F6 387 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 PCED1AQ9H1Q7 454 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 ELL3Q9HB65 397 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-209ENST00000580095 PPP1R14DQ9NXH3 145 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 CEP192Q8TEP8 1941 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 IGKV1-9A0A0C4DH69 117 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 RFPL4AA6NLU0 287 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 DISC1C4P0D8 188 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 RFPL4AL1F8VTS6 287 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 SULT1C2O00338 296 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF205O95201 554 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 PLATP00750 562 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 MICBQ29980 383 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 DEGS2Q6QHC5 323 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 BEND4Q6ZU67 534 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 ARMC10Q8N2F6 343 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 OR5M8Q8NGP6 311 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 OR10R2Q8NGX6 335 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 OR1S1Q8NH92 325 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 ARHGAP5-AS1Q96IT6 56 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 LPAR5Q9H1C0 372 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 PRDM6Q9NQX0 595 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 GSN-AS1Q9NRJ2 163 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 KIF25Q9UIL4 384 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 SIT1Q9Y3P8 196 aa9.25□□□□□ -0.93
TOP3A-209ENST00000580095 CHCHD2Q9Y6H1 151 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-209ENST00000580095 C9orf170A2RU37 121 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms