RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 FAM185AQ8N0U4 392 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 OR51A2Q8NGJ7 313 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 SUCNR1Q9BXA5 334 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 CBY1Q9Y3M2 126 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 ABCD4O14678 606 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 TNFRSF10CO14798 259 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 RAB5AP20339 215 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 SSTP61278 116 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 TOE1Q96GM8 510 aaKnown RBP11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 MAGT1Q9H0U3 335 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 GPR173Q9NS66 373 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 MRPL22Q9NWU5 206 aaKnown RBP11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 TP53TG5Q9Y2B4 290 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 WSB1Q9Y6I7 421 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 ALPK2Q86TB3 2170 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 SERPINE3A8MV23 424 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 ABOP16442 354 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 APOBEC1P41238 236 aaKnown RBP11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 MOGAT2Q3SYC2 334 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 SLC16A14Q7RTX9 510 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 THNSL2Q86YJ6 484 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 OR10AC1Q8NH08 325 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 BADQ92934 168 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 MRGPRX3Q96LB0 322 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 NMES1Q9C002 83 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 FAM221AA4D161 298 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 OR2W5A6NFC9 320 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 ZGLP1P0C6A0 271 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 DRD1P21728 446 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 ADPRHP54922 357 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 BAXQ07812 192 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 PRSS53Q2L4Q9 553 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 SEMA6DQ8NFY4 1073 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 POC1BQ8TC44 478 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 PGLYRP3Q96LB9 341 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 TOX2Q96NM4 488 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 SMIM7Q9BQ49 75 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 BRWD1Q9NSI6 2320 aa11.79□□□□□ -0.52
PCDHGB3-201ENST00000576222 ANKRD30BLA7E2S9 258 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 SEC14L6B5MCN3 397 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 HSBP1L1C9JCN9 74 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 HIST1H1DP16402 221 aaKnown RBP11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 EFNB2P52799 333 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 SP6Q3SY56 376 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 ZNF787Q6DD87 383 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 GHRLQ9UBU3 117 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 OR14J1Q9UGF5 321 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 NSG1A0A0A6YYJ2 146 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 HSD17B6O14756 317 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 CD63P08962 238 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 TM4SF4P48230 202 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 TMEM33P57088 247 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 CLEC12BQ2HXU8 276 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 PRICKLE4Q2TBC4 344 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 CST9Q5W186 159 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 FAM199XQ6PEV8 388 aaPredicted RBP11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 VN1R4Q7Z5H5 301 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 LHX4Q969G2 390 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 LAMP3Q9UQV4 416 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 RCL1Q9Y2P8 373 aaKnown RBP11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 NEUROG3Q9Y4Z2 214 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 QDPRP09417 244 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 CD79AP11912 226 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 GSK3AP49840 483 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 THEM4Q5T1C6 240 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 RPUSD4Q96CM3 377 aaKnown RBP11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 ARHGAP5-AS1Q96IT6 56 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 TXN2Q99757 166 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 NRIP2Q9BQI9 281 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 ARV1Q9H2C2 271 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 PIKFYVEQ9Y2I7 2098 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 MFNGO00587 321 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 LY86O95711 162 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 CFIP05156 583 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 G0S2P27469 103 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 RBP2P50120 134 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 RPP30P78346 268 aaKnown RBP11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 OR51H1Q8NH63 302 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 MOGAT1Q96PD6 335 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 TSPAN32Q96QS1 320 aa11.78□□□□□ -0.52
PCDHGB3-201ENST00000576222 MAP1BP46821 2468 aaKnown RBP11.77□□□□□ -0.52
PCDHGB3-201ENST00000576222 MED19A0JLT2 244 aaPredicted RBP11.77□□□□□ -0.52
PCDHGB3-201ENST00000576222 C17orf112F2Z3M2 114 aa11.77□□□□□ -0.52
PCDHGB3-201ENST00000576222 PTP4A3O75365 173 aa11.77□□□□□ -0.52
PCDHGB3-201ENST00000576222 ERVK-16P61578 105 aa11.77□□□□□ -0.52
PCDHGB3-201ENST00000576222 PPP2CBP62714 309 aa11.77□□□□□ -0.52
PCDHGB3-201ENST00000576222 PPP2CAP67775 309 aa11.77□□□□□ -0.52
PCDHGB3-201ENST00000576222 ZNF528Q3MIS6 628 aa11.77□□□□□ -0.52
PCDHGB3-201ENST00000576222 GGNBP1Q5YKI7 109 aa11.77□□□□□ -0.52
PCDHGB3-201ENST00000576222 OR8G2PQ6IF36 304 aa11.77□□□□□ -0.52
PCDHGB3-201ENST00000576222 ADAM19Q9H013 955 aa11.77□□□□□ -0.52
PCDHGB3-201ENST00000576222 CNTD2Q9H8S5 307 aa11.77□□□□□ -0.52
PCDHGB3-201ENST00000576222 SLC17A4Q9Y2C5 497 aa11.77□□□□□ -0.52
PCDHGB3-201ENST00000576222 AMDHD2Q9Y303 409 aa11.77□□□□□ -0.52
PCDHGB3-201ENST00000576222 QSER1Q2KHR3 1735 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 CCDC187A0A096LP49 1063 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 CTSVO60911 334 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 H2BFSP57053 126 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 NANOS3P60323 173 aaKnown RBP11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 MLF2Q15773 248 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms