RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 ZNF674Q2M3X9 581 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 RSC1A1Q92681 617 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 SCARF2Q96GP6 870 aaPredicted RBP12.93□□□□□ -0.34
SCARF1-209ENST00000576012 TGM7Q96PF1 710 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 SUCNR1Q9BXA5 334 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 LYRM4Q9HD34 91 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 MED29Q9NX70 200 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 EHFQ9NZC4 300 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 ZNF264O43296 627 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 NSA2O95478 260 aaKnown RBP12.93□□□□□ -0.34
SCARF1-209ENST00000576012 MELTFP08582 738 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 H2BFMP0C1H6 154 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 PRF1P14222 555 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 CSNK2A1P68400 391 aaPredicted RBP12.93□□□□□ -0.34
SCARF1-209ENST00000576012 CYCSP99999 105 aaKnown RBP12.93□□□□□ -0.34
SCARF1-209ENST00000576012 TSC22D1Q15714 1073 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 GLIPR1L1Q6UWM5 242 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 DMRTC2Q8IXT2 367 aaPredicted RBP12.93□□□□□ -0.34
SCARF1-209ENST00000576012 ZDHHC22Q8N966 263 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 CSNK2A3Q8NEV1 391 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 MFSD8Q8NHS3 518 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 SH3BGRL3Q9H299 93 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 SEBOXQ9HB31 216 aaPredicted RBP12.93□□□□□ -0.34
SCARF1-209ENST00000576012 SYT7O43581 403 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 CD63P08962 238 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 AGAP20933 346 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 S100A2P29034 98 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 SSBP1Q04837 148 aaKnown RBP12.93□□□□□ -0.34
SCARF1-209ENST00000576012 C14orf28Q4W4Y0 310 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 CATSPERDQ86XM0 798 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 OR9K2Q8NGE7 335 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 FLVCR1-AS1Q8TAF5 88 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 MARS2Q96GW9 593 aaKnown RBP12.93□□□□□ -0.34
SCARF1-209ENST00000576012 ARHGAP5-AS1Q96IT6 56 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 SMIM8Q96KF7 97 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 RARRES2Q99969 163 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 RAB22AQ9UL26 194 aa12.93□□□□□ -0.34
SCARF1-209ENST00000576012 A0A1B0GTQ1 180 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 MFNGO00587 321 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 RAD51DO75771 328 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 CD5P06127 495 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 CX3CR1P49238 355 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 SUPT4H1P63272 117 aaKnown RBP12.92□□□□□ -0.34
SCARF1-209ENST00000576012 HIST2H3AQ71DI3 136 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 GKN2Q86XP6 184 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 C17orf78Q8N4C9 275 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 OR5H2Q8NGV7 314 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 RAB3CQ96E17 227 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 KCNJ16Q9NPI9 418 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 SLC17A5Q9NRA2 495 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 METTL1Q9UBP6 276 aaKnown RBP12.92□□□□□ -0.34
SCARF1-209ENST00000576012 TDRD6O60522 2096 aaKnown RBP12.92□□□□□ -0.34
SCARF1-209ENST00000576012 IGKV1D-43A0A0B4J1Z2 117 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 ZNF878C9JN71 531 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 OR2C1O95371 312 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 UTS2O95399 124 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 PNMTP11086 282 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 MDKP21741 143 aaPredicted RBP12.92□□□□□ -0.34
SCARF1-209ENST00000576012 OR3A4PP47883 348 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 SCAND1P57086 179 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 SRSF4Q08170 494 aaKnown RBP12.92□□□□□ -0.34
SCARF1-209ENST00000576012 GPM6BQ13491 265 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 MAJINQ3KP22 176 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 SSX9Q7RTT3 188 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 BADQ92934 168 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 NMES1Q9C002 83 aa12.92□□□□□ -0.34
SCARF1-209ENST00000576012 A6NCN8 305 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 HCKP08631 526 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 FBP1P09467 338 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 HKR1P10072 659 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 GJA4P35212 333 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 ZNF93P35789 620 aaPredicted RBP12.91□□□□□ -0.34
SCARF1-209ENST00000576012 KIR2DS3Q14952 304 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 PLAC9Q5JTB6 97 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 TSPO2Q5TGU0 170 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 TMEM244Q5VVB8 128 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 EIF5AL1Q6IS14 154 aaKnown RBP12.91□□□□□ -0.34
SCARF1-209ENST00000576012 FAM180AQ6UWF9 173 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 BTNL8Q6UX41 500 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 OR51E1Q8TCB6 317 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 TOMM40LQ969M1 308 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 GPX7Q96SL4 187 aaPredicted RBP12.91□□□□□ -0.34
SCARF1-209ENST00000576012 CDC6Q99741 560 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 OCSTAMPQ9BR26 566 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 VSX1Q9NZR4 365 aaPredicted RBP12.91□□□□□ -0.34
SCARF1-209ENST00000576012 POLR1DQ9Y2S0 133 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 RHBDD3Q9Y3P4 386 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 RHPN2P1A8MT19 583 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 C17orf105B2RV13 164 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 NPIPB9F8W1W9 429 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 WRBO00258 174 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 SFT2D2O95562 160 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 NAAAQ02083 359 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 TANGO2Q6ICL3 276 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 P4HA3Q7Z4N8 544 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 HOGA1Q86XE5 327 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 OR52N5Q8NH56 324 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 FAM213BQ8TBF2 198 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 KPTNQ9Y664 436 aa12.91□□□□□ -0.34
SCARF1-209ENST00000576012 TMEM238LA0A1B0GVL6 79 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms